Detailed information NTG0766201

Bioinformatically predicted

Overview

• Name: recQ
• Type: Machinery gene
• Locus tag: QIH94_RS42855
• Genome accession: NZ_CP126006
• Coordinates: 9022312..9024177 (-)
• Length: 621 a.a.
• NCBI ID: WP_304492446.1
• Uniprot ID: -
• Organism: Bradyrhizobium japonicum strain S06K-Bj
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 9017312..9029177

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QIH94_RS42830 (QIH94_42830)	-	9017567..9019150 (+)	1584	WP_304492449.1	sensor domain-containing diguanylate cyclase	-
QIH94_RS42835 (QIH94_42835)	-	9019167..9019727 (-)	561	WP_248881105.1	carboxymuconolactone decarboxylase family protein	-
QIH94_RS42840 (QIH94_42840)	-	9019882..9020457 (+)	576	WP_304492448.1	hypothetical protein	-
QIH94_RS42845 (QIH94_42845)	-	9020483..9020947 (-)	465	WP_304492447.1	Lrp/AsnC family transcriptional regulator	-
QIH94_RS42850 (QIH94_42850)	-	9021111..9022124 (+)	1014	WP_028153143.1	1-aminocyclopropane-1-carboxylate deaminase	-
QIH94_RS42855 (QIH94_42855)	recQ	9022312..9024177 (-)	1866	WP_304492446.1	DNA helicase RecQ	Machinery gene
QIH94_RS42860 (QIH94_42860)	-	9024449..9025192 (-)	744	WP_304494681.1	polysaccharide deacetylase family protein	-
QIH94_RS42865 (QIH94_42865)	-	9025296..9026297 (-)	1002	WP_041960028.1	homoserine O-succinyltransferase	-
QIH94_RS42870 (QIH94_42870)	-	9026310..9027611 (-)	1302	WP_304492444.1	O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein	-

Sequence

Protein

• Length: 621 a.a.
• Molecular weight: 68079.86 Da
• Isoelectric Point: 7.9661

>NTDB_id=766201 QIH94_RS42855 WP_304492446.1 9022312..9024177(-) (recQ) [Bradyrhizobium japonicum strain S06K-Bj]
MSAPSTAPLPAPANGRDALSVLHSVFGLPGFRGAQGEIIRHVTDGGNCLVLMPTGGGKSLCYQLPSLLREGCGIVVSPLI
ALMRDQVAGLLEAGVNAAALNSSLTLQEASDIERRLIAGDLDLLYVAPERLVTPRCLSLLAQAKVALFAIDEAHCVSQWG
HDFRPEYVGLSIIAERFPNVPRIALTATADELTRKEIVKRLRLADSPQFVSSFDRPNIRYEIVDKRNAVSQLKEFIRERH
AGDAGVVYCLSRNRVEEVAAALDDAGIAALPYHAGLDSSIRSRNQDRFLNEDGIVIVATIAFGMGIDKPDVRFVAHLDLP
KSIEAYYQETGRAGRDGKPSAAWMAYGLSDIVQQRRMIDESSGSDDFKRVSIGKLDALVGLAETAQCRRKRLLAYFGEAE
TANNCGNCDNCLTPPKMRDGKVLAQKLLSCAYRTGQRFGAMQLIDVLIGRLTEKVTQFGHDKLSVFGIGRELNEKQWRTV
LRQLVAMGHLYSDSEAFGALKLTESARGVLRGETEVWLREEAPGTRVRASRTKSRRGDLAPAANAPQGDVDPELRARLRS
WRSDIARERGVPAYVVLHDATIDGIVRAWPTTLDELRNVPGIGDKKLEHYGDELLQIVKTR

Nucleotide

• Length: 1866 bp

>NTDB_id=766201 QIH94_RS42855 WP_304492446.1 9022312..9024177(-) (recQ) [Bradyrhizobium japonicum strain S06K-Bj]
ATGTCCGCTCCCTCCACCGCCCCGCTGCCTGCGCCGGCCAACGGCCGCGACGCGCTGTCGGTGCTACATTCGGTGTTCGG
CCTGCCGGGGTTCCGCGGCGCGCAGGGTGAGATCATCCGGCACGTCACGGATGGCGGCAATTGCCTGGTCTTGATGCCGA
CCGGCGGCGGCAAGTCGCTGTGCTATCAATTGCCGTCACTGCTGCGCGAAGGCTGCGGTATCGTGGTGTCGCCGCTGATC
GCGCTGATGCGCGACCAGGTCGCCGGCCTGCTCGAGGCCGGGGTCAATGCCGCCGCGCTGAACTCGTCGTTGACGCTGCA
GGAAGCTTCCGACATCGAGCGCCGCCTGATCGCGGGCGATCTCGACCTGCTCTATGTCGCGCCGGAACGCCTTGTGACGC
CGCGCTGCCTGTCGCTGCTGGCGCAGGCGAAGGTCGCGCTGTTCGCGATCGACGAGGCGCATTGCGTCTCGCAATGGGGC
CATGACTTCCGCCCCGAATATGTCGGCCTCTCCATCATCGCCGAACGCTTTCCGAACGTTCCGCGCATCGCGCTGACCGC
GACCGCCGACGAGCTGACGCGCAAGGAGATCGTCAAGCGCCTCCGGCTCGCCGACAGCCCGCAATTCGTCTCCAGCTTCG
ACCGCCCGAATATCCGCTACGAGATCGTCGACAAGCGCAACGCAGTGTCGCAGCTGAAGGAATTCATCCGGGAGCGGCAT
GCGGGCGACGCCGGCGTGGTCTATTGCCTGTCGCGCAATCGCGTCGAGGAGGTTGCTGCCGCGCTCGACGACGCCGGCAT
TGCGGCGCTGCCCTATCACGCCGGGCTCGACAGCAGCATACGCTCGCGCAACCAGGATCGGTTCCTCAACGAGGACGGCA
TCGTCATCGTCGCGACCATCGCCTTCGGCATGGGCATCGACAAGCCCGACGTCCGCTTCGTCGCCCATCTCGATCTGCCC
AAGAGCATCGAGGCCTACTATCAGGAGACGGGGCGCGCCGGCCGCGACGGCAAGCCGTCGGCGGCCTGGATGGCCTATGG
TCTTTCCGACATCGTGCAGCAGCGCCGCATGATCGACGAGTCCAGCGGTTCTGACGATTTCAAGCGGGTGTCGATCGGCA
AGCTGGACGCACTGGTCGGCCTCGCCGAGACCGCGCAGTGCCGGCGCAAGCGGCTGCTCGCCTATTTCGGCGAGGCGGAG
ACGGCGAACAATTGCGGCAATTGCGACAACTGCCTGACGCCGCCCAAGATGCGCGACGGCAAGGTGCTGGCGCAGAAGCT
GCTGTCCTGCGCCTACCGCACCGGGCAGCGTTTCGGTGCGATGCAGCTGATCGACGTGCTGATTGGCCGCCTCACCGAAA
AGGTGACGCAGTTCGGCCACGACAAATTGTCCGTGTTCGGCATCGGGCGCGAGCTGAACGAGAAGCAGTGGCGCACGGTG
CTGCGGCAGCTGGTCGCGATGGGCCATTTGTACAGCGACAGCGAGGCGTTCGGCGCGCTGAAGCTGACGGAGAGCGCGCG
CGGCGTGCTACGCGGCGAGACCGAGGTGTGGCTGCGCGAGGAAGCGCCGGGCACGCGTGTTCGCGCGAGCCGGACGAAAT
CCCGCCGTGGTGACCTCGCGCCTGCGGCCAACGCGCCGCAGGGCGATGTCGATCCCGAATTGCGGGCGCGGCTGAGGTCC
TGGCGTTCGGACATCGCGCGCGAACGCGGCGTGCCGGCCTATGTCGTGCTGCACGATGCCACCATCGACGGCATCGTCCG
GGCCTGGCCGACGACGCTGGACGAGCTCCGCAACGTGCCCGGCATCGGCGACAAGAAGCTCGAGCATTACGGCGACGAAC
TGCTGCAGATCGTCAAGACGCGGTAG

Domains

Predicted by InterProScan.

• DEAD/DEAH box helicase (DEAD) (34-190)

• RecQ zinc-binding (RecQ_Zn_bind) (349-412)

• HRDC domain (HRDC) (553-618)

• RQC domain (RQC) (414-522)

• Helicase conserved C-terminal domain (Helicase_C) (229-336)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recQ	Bacillus subtilis subsp. subtilis str. 168	38.017	97.424	0.37