Detailed information NTG0766136

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: QIH96_RS45130
• Genome accession: NZ_CP126005
• Coordinates: 9537871..9538857 (+)
• Length: 328 a.a.
• NCBI ID: WP_038935745.1
• Uniprot ID: -
• Organism: Bradyrhizobium japonicum strain S04E-Bj
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 9532871..9543857

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QIH96_RS45110 (QIH96_45105)	-	9533383..9534981 (+)	1599	WP_304492052.1	ABC transporter substrate-binding protein	-
QIH96_RS45115 (QIH96_45110)	-	9535017..9535964 (+)	948	WP_014491190.1	ABC transporter permease	-
QIH96_RS45120 (QIH96_45115)	-	9535974..9536867 (+)	894	WP_014491189.1	ABC transporter permease	-
QIH96_RS45125 (QIH96_45120)	-	9536867..9537874 (+)	1008	WP_028149097.1	ABC transporter ATP-binding protein	-
QIH96_RS45130 (QIH96_45125)	amiE	9537871..9538857 (+)	987	WP_038935745.1	ABC transporter ATP-binding protein	Regulator
QIH96_RS45135 (QIH96_45130)	-	9538829..9539641 (-)	813	WP_304492053.1	hypothetical protein	-
QIH96_RS45140 (QIH96_45135)	-	9539888..9541861 (-)	1974	WP_304492054.1	acetyl-CoA carboxylase biotin carboxylase subunit	-
QIH96_RS45145 (QIH96_45140)	-	9541858..9543474 (-)	1617	WP_304492055.1	acyl-CoA carboxylase subunit beta	-

Sequence

Protein

• Length: 328 a.a.
• Molecular weight: 35768.25 Da
• Isoelectric Point: 9.0682

>NTDB_id=766136 QIH96_RS45130 WP_038935745.1 9537871..9538857(+) (amiE) [Bradyrhizobium japonicum strain S04E-Bj]
MTEALLEVTDLKKHYAVRAGVLRRQVGTVHAVDGVSFSVHTGETLGLVGESGCGKSTVARSVLRLVEPTSGQIRLDGEDI
TRLSKTALRPHRRSMQIVFQDPFASLNPRMTAGDIVGEPLAVHGLASGKELEARTAKLFEQVGLRPDQMRNFPHQFSGGQ
RQRICIARALALGPRLIVCDEPVSALDVSIQAQVINLLIDLQKQHGFSYLFIAHDLAVVAHISHRVAVMYLGRIVEIADK
DELFRNPRHPYTQALLASVPVANPFAKKLAPLVDGDVPSPVNPPSGCAFHTRCRFAIERCKTERPALVNAGDRHQVACLL
NEGTGRGQ

Nucleotide

• Length: 987 bp

>NTDB_id=766136 QIH96_RS45130 WP_038935745.1 9537871..9538857(+) (amiE) [Bradyrhizobium japonicum strain S04E-Bj]
ATGACCGAGGCGCTGCTCGAAGTCACCGATCTCAAGAAGCACTACGCGGTGCGCGCCGGCGTGTTGCGGCGGCAGGTCGG
CACCGTGCATGCGGTCGACGGCGTCTCGTTCTCGGTTCATACCGGCGAGACGCTCGGTCTGGTCGGCGAATCCGGCTGCG
GCAAGTCGACGGTGGCGCGCAGCGTGCTGCGGCTGGTCGAGCCGACTTCGGGTCAGATCCGCCTTGATGGAGAGGACATC
ACCCGTCTCTCCAAGACCGCGCTGCGGCCGCATCGCCGCTCGATGCAGATCGTGTTCCAGGACCCGTTCGCTTCGCTCAA
TCCGCGCATGACCGCCGGCGACATCGTCGGCGAGCCGCTCGCCGTGCATGGGCTCGCAAGCGGCAAGGAGCTGGAAGCGC
GTACCGCAAAACTGTTCGAGCAGGTGGGCCTGCGGCCCGATCAGATGCGCAACTTCCCGCATCAATTTTCCGGCGGCCAG
CGCCAGCGCATCTGCATCGCGCGGGCGCTTGCGCTGGGTCCACGCCTGATCGTCTGCGACGAGCCGGTCTCCGCGCTCGA
CGTCTCGATCCAGGCGCAGGTGATCAATCTCCTGATCGACCTGCAGAAGCAGCACGGCTTCTCCTACCTCTTCATCGCGC
ATGACCTCGCCGTGGTCGCCCATATCAGCCACCGCGTCGCCGTGATGTATCTCGGCCGCATCGTCGAGATCGCCGACAAG
GACGAGCTGTTCCGCAATCCGCGCCATCCCTACACGCAGGCCCTGCTCGCGTCAGTGCCGGTTGCGAACCCGTTTGCCAA
GAAGCTCGCGCCGCTGGTCGACGGCGACGTGCCGAGCCCGGTCAATCCGCCATCCGGCTGCGCGTTCCACACCCGCTGCC
GGTTTGCGATCGAGCGGTGCAAGACGGAGCGGCCGGCGCTGGTGAACGCTGGTGATAGGCATCAGGTGGCGTGTCTGCTC
AACGAGGGGACGGGGCGGGGCCAGTAG

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (33-183)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (235-300)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	39.64	100	0.402
amiE	Streptococcus thermophilus LMD-9	39.339	100	0.399
amiE	Streptococcus thermophilus LMG 18311	39.339	100	0.399
oppD	Streptococcus mutans UA159	39.815	98.78	0.393
amiF	Streptococcus salivarius strain HSISS4	45.588	82.927	0.378
amiF	Streptococcus thermophilus LMG 18311	45.185	82.317	0.372
amiF	Streptococcus thermophilus LMD-9	45.185	82.317	0.372