Detailed information NTG0766074

Bioinformatically predicted

Overview

• Name: recQ
• Type: Machinery gene
• Locus tag: QIH96_RS02930
• Genome accession: NZ_CP126005
• Coordinates: 653067..654932 (+)
• Length: 621 a.a.
• NCBI ID: WP_304492446.1
• Uniprot ID: -
• Organism: Bradyrhizobium japonicum strain S04E-Bj
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 648067..659932

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QIH96_RS02915 (QIH96_02915)	-	649633..650934 (+)	1302	WP_304492444.1	O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein	-
QIH96_RS02920 (QIH96_02920)	-	650947..651948 (+)	1002	WP_041960028.1	homoserine O-succinyltransferase	-
QIH96_RS02925 (QIH96_02925)	-	652052..652795 (+)	744	WP_304494681.1	polysaccharide deacetylase family protein	-
QIH96_RS02930 (QIH96_02930)	recQ	653067..654932 (+)	1866	WP_304492446.1	DNA helicase RecQ	Machinery gene
QIH96_RS02935 (QIH96_02935)	-	655120..656133 (-)	1014	WP_028153143.1	1-aminocyclopropane-1-carboxylate deaminase	-
QIH96_RS02940 (QIH96_02940)	-	656297..656761 (+)	465	WP_304492447.1	Lrp/AsnC family transcriptional regulator	-
QIH96_RS02945 (QIH96_02945)	-	656787..657362 (-)	576	WP_304492448.1	hypothetical protein	-
QIH96_RS02950 (QIH96_02950)	-	657517..658077 (+)	561	WP_248881105.1	carboxymuconolactone decarboxylase family protein	-
QIH96_RS02955 (QIH96_02955)	-	658094..659677 (-)	1584	WP_304492449.1	sensor domain-containing diguanylate cyclase	-

Sequence

Protein

• Length: 621 a.a.
• Molecular weight: 68079.86 Da
• Isoelectric Point: 7.9661

>NTDB_id=766074 QIH96_RS02930 WP_304492446.1 653067..654932(+) (recQ) [Bradyrhizobium japonicum strain S04E-Bj]
MSAPSTAPLPAPANGRDALSVLHSVFGLPGFRGAQGEIIRHVTDGGNCLVLMPTGGGKSLCYQLPSLLREGCGIVVSPLI
ALMRDQVAGLLEAGVNAAALNSSLTLQEASDIERRLIAGDLDLLYVAPERLVTPRCLSLLAQAKVALFAIDEAHCVSQWG
HDFRPEYVGLSIIAERFPNVPRIALTATADELTRKEIVKRLRLADSPQFVSSFDRPNIRYEIVDKRNAVSQLKEFIRERH
AGDAGVVYCLSRNRVEEVAAALDDAGIAALPYHAGLDSSIRSRNQDRFLNEDGIVIVATIAFGMGIDKPDVRFVAHLDLP
KSIEAYYQETGRAGRDGKPSAAWMAYGLSDIVQQRRMIDESSGSDDFKRVSIGKLDALVGLAETAQCRRKRLLAYFGEAE
TANNCGNCDNCLTPPKMRDGKVLAQKLLSCAYRTGQRFGAMQLIDVLIGRLTEKVTQFGHDKLSVFGIGRELNEKQWRTV
LRQLVAMGHLYSDSEAFGALKLTESARGVLRGETEVWLREEAPGTRVRASRTKSRRGDLAPAANAPQGDVDPELRARLRS
WRSDIARERGVPAYVVLHDATIDGIVRAWPTTLDELRNVPGIGDKKLEHYGDELLQIVKTR

Nucleotide

• Length: 1866 bp

>NTDB_id=766074 QIH96_RS02930 WP_304492446.1 653067..654932(+) (recQ) [Bradyrhizobium japonicum strain S04E-Bj]
ATGTCCGCTCCCTCCACCGCCCCGCTGCCTGCGCCGGCCAACGGCCGCGACGCGCTGTCGGTGCTACATTCGGTGTTCGG
CCTGCCGGGGTTCCGCGGCGCGCAGGGTGAGATCATCCGGCACGTCACGGATGGCGGCAATTGCCTGGTCTTGATGCCGA
CCGGCGGCGGCAAGTCGCTGTGCTATCAATTGCCGTCACTGCTGCGCGAAGGCTGCGGTATCGTGGTGTCGCCGCTGATC
GCGCTGATGCGCGACCAGGTCGCCGGCCTGCTCGAGGCCGGGGTCAATGCCGCCGCGCTGAACTCGTCGTTGACGCTGCA
GGAAGCTTCCGACATCGAGCGCCGCCTGATCGCGGGCGATCTCGACCTGCTCTATGTCGCGCCGGAACGCCTTGTGACGC
CGCGCTGCCTGTCGCTGCTGGCGCAGGCGAAGGTCGCGCTGTTCGCGATCGACGAGGCGCATTGCGTCTCGCAATGGGGC
CATGACTTCCGCCCCGAATATGTCGGCCTCTCCATCATCGCCGAACGCTTTCCGAACGTTCCGCGCATCGCGCTGACCGC
GACCGCCGACGAGCTGACGCGCAAGGAGATCGTCAAGCGCCTCCGGCTCGCCGACAGCCCGCAATTCGTCTCCAGCTTCG
ACCGCCCGAATATCCGCTACGAGATCGTCGACAAGCGCAACGCAGTGTCGCAGCTGAAGGAATTCATCCGGGAGCGGCAT
GCGGGCGACGCCGGCGTGGTCTATTGCCTGTCGCGCAATCGCGTCGAGGAGGTTGCTGCCGCGCTCGACGACGCCGGCAT
TGCGGCGCTGCCCTATCACGCCGGGCTCGACAGCAGCATACGCTCGCGCAACCAGGATCGGTTCCTCAACGAGGACGGCA
TCGTCATCGTCGCGACCATCGCCTTCGGCATGGGCATCGACAAGCCCGACGTCCGCTTCGTCGCCCATCTCGATCTGCCC
AAGAGCATCGAGGCCTACTATCAGGAGACGGGGCGCGCCGGCCGCGACGGCAAGCCGTCGGCGGCCTGGATGGCCTATGG
TCTTTCCGACATCGTGCAGCAGCGCCGCATGATCGACGAGTCCAGCGGTTCTGACGATTTCAAGCGGGTGTCGATCGGCA
AGCTGGACGCACTGGTCGGCCTCGCCGAGACCGCGCAGTGCCGGCGCAAGCGGCTGCTCGCCTATTTCGGCGAGGCGGAG
ACGGCGAACAATTGCGGCAATTGCGACAACTGCCTGACGCCGCCCAAGATGCGCGACGGCAAGGTGCTGGCGCAGAAGCT
GCTGTCCTGCGCCTACCGCACCGGGCAGCGTTTCGGTGCGATGCAGCTGATCGACGTGCTGATTGGCCGCCTCACCGAAA
AGGTGACGCAGTTCGGCCACGACAAATTGTCCGTGTTCGGCATCGGGCGCGAGCTGAACGAGAAGCAGTGGCGCACGGTG
CTGCGGCAGCTGGTCGCGATGGGCCATTTGTACAGCGACAGCGAGGCGTTCGGCGCGCTGAAGCTGACGGAGAGCGCGCG
CGGCGTGCTACGCGGCGAGACCGAGGTGTGGCTGCGCGAGGAAGCGCCGGGCACGCGTGTTCGCGCGAGCCGGACGAAAT
CCCGCCGTGGTGACCTCGCGCCTGCGGCCAACGCGCCGCAGGGCGATGTCGATCCCGAATTGCGGGCGCGGCTGAGGTCC
TGGCGTTCGGACATCGCGCGCGAACGCGGCGTGCCGGCCTATGTCGTGCTGCACGATGCCACCATCGACGGCATCGTCCG
GGCCTGGCCGACGACGCTGGACGAGCTCCGCAACGTGCCCGGCATCGGCGACAAGAAGCTCGAGCATTACGGCGACGAAC
TGCTGCAGATCGTCAAGACGCGGTAG

Domains

Predicted by InterProScan.

• DEAD/DEAH box helicase (DEAD) (34-190)

• RecQ zinc-binding (RecQ_Zn_bind) (349-412)

• HRDC domain (HRDC) (553-618)

• RQC domain (RQC) (414-522)

• Helicase conserved C-terminal domain (Helicase_C) (229-336)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recQ	Bacillus subtilis subsp. subtilis str. 168	38.017	97.424	0.37