Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   QNK08_RS19460 Genome accession   NZ_CP125983
Coordinates   3634701..3635075 (-) Length   124 a.a.
NCBI ID   WP_003227621.1    Uniprot ID   A0A9W5LLN9
Organism   Bacillus subtilis strain ZKY04     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3629701..3640075
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNK08_RS19435 (QNK08_19460) - 3629866..3630021 (-) 156 WP_032729196.1 hypothetical protein -
  QNK08_RS19440 (QNK08_19465) glpX 3630241..3631206 (-) 966 WP_003242962.1 class II fructose-bisphosphatase -
  QNK08_RS19445 (QNK08_19470) murAB 3631237..3632526 (-) 1290 WP_003227628.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  QNK08_RS19450 (QNK08_19475) fsa 3632905..3633543 (-) 639 WP_003227626.1 fructose-6-phosphate aldolase -
  QNK08_RS19455 (QNK08_19480) fbaA 3633663..3634520 (-) 858 WP_003243339.1 class II fructose-bisphosphate aldolase -
  QNK08_RS19460 (QNK08_19485) letA 3634701..3635075 (-) 375 WP_003227621.1 sporulation initiation phosphotransferase Spo0F Regulator
  QNK08_RS19465 (QNK08_19490) ywjG 3635241..3635762 (+) 522 WP_014481199.1 DUF2529 domain-containing protein -
  QNK08_RS19475 (QNK08_19500) pyrG 3637157..3638764 (-) 1608 WP_003227612.1 glutamine hydrolyzing CTP synthase -
  QNK08_RS19480 (QNK08_19505) rpoE 3639006..3639512 (-) 507 WP_014481200.1 DNA-directed RNA polymerase subunit delta -

Sequence

Protein


Download         Length: 124 a.a.        Molecular weight: 14227.68 Da        Isoelectric Point: 4.6400

>NTDB_id=766057 QNK08_RS19460 WP_003227621.1 3634701..3635075(-) (letA) [Bacillus subtilis strain ZKY04]
MMNEKILIVDDQYGIRILLNEVFNKEGYQTFQAANGLQALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVII
MTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVKKYLPLKSN

Nucleotide


Download         Length: 375 bp        

>NTDB_id=766057 QNK08_RS19460 WP_003227621.1 3634701..3635075(-) (letA) [Bacillus subtilis strain ZKY04]
ATGATGAATGAAAAAATTTTAATCGTTGATGATCAATACGGCATTCGTATTTTGCTAAATGAAGTGTTCAATAAAGAAGG
CTACCAGACGTTTCAGGCTGCGAACGGCCTGCAGGCGCTTGACATTGTGACAAAAGAACGGCCCGACCTTGTGCTTTTGG
ACATGAAAATTCCCGGCATGGACGGAATCGAAATCTTAAAACGGATGAAGGTCATTGACGAAAACATCCGGGTCATTATC
ATGACGGCATACGGAGAGCTCGACATGATCCAGGAATCGAAGGAATTGGGCGCTCTGACGCACTTTGCAAAGCCGTTTGA
CATCGACGAAATCAGAGACGCCGTCAAAAAATATCTGCCCCTGAAGTCTAACTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(6-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A9W5LLN9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

38.462

94.355

0.363
  letA Legionella pneumophila strain ERS1305867

38.462

94.355

0.363