Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   QNK08_RS15205 Genome accession   NZ_CP125983
Coordinates   2846406..2847101 (-) Length   231 a.a.
NCBI ID   WP_017695455.1    Uniprot ID   -
Organism   Bacillus subtilis strain ZKY04     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2841406..2852101
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNK08_RS15185 (QNK08_15215) - 2841485..2842732 (-) 1248 WP_031600262.1 IS256-like element ISBsu2 family transposase -
  QNK08_RS15190 (QNK08_15220) bceB 2842826..2844556 (-) 1731 Protein_2947 bacitracin ABC transporter permease BceB -
  QNK08_RS15195 (QNK08_15225) bceA 2844546..2845307 (-) 762 WP_003229137.1 bacitracin ABC transporter ATP-binding protein BceA -
  QNK08_RS15200 (QNK08_15230) bceS 2845409..2846413 (-) 1005 WP_024573099.1 two-component sensor histidine kinase BceS -
  QNK08_RS15205 (QNK08_15235) braR 2846406..2847101 (-) 696 WP_017695455.1 two-component response regulator BceR Regulator
  QNK08_RS15210 (QNK08_15240) ytrF 2847199..2848509 (-) 1311 WP_017695454.1 ABC transporter permease YtrF -
  QNK08_RS15215 (QNK08_15245) ytrE 2848499..2849194 (-) 696 WP_014477726.1 ABC transporter ATP-binding protein YtrE -
  QNK08_RS15220 (QNK08_15250) ytrD 2849209..2850186 (-) 978 WP_014480623.1 ABC transporter permease YtrD -
  QNK08_RS15225 (QNK08_15255) - 2850218..2851204 (-) 987 WP_069964267.1 ABC transporter permease subunit -
  QNK08_RS15230 (QNK08_15260) ytrB 2851198..2852076 (-) 879 WP_003229123.1 ABC transporter ATP-binding protein YtrB -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26907.80 Da        Isoelectric Point: 5.3775

>NTDB_id=766036 QNK08_RS15205 WP_017695455.1 2846406..2847101(-) (braR) [Bacillus subtilis strain ZKY04]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFAAVNPDCVIIDVQLPKFDGFHWCRLIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFEVLIAKIQAMFRRVHHYNTEPNTIKTWCGAAVDAEQNLVSNDKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDALQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=766036 QNK08_RS15205 WP_017695455.1 2846406..2847101(-) (braR) [Bacillus subtilis strain ZKY04]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCACTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTGCGGCGGTTAATCCTGATTGTGTCATTATTGATGTAC
AGCTGCCTAAATTTGACGGTTTTCATTGGTGCCGGCTGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
CGGGATCATCCTGCTGATATGGTGATGTCCATGCAGCTCGGGGCAGATGACTTTATTCAAAAGCCATTTCATTTTGAAGT
GCTGATCGCGAAAATCCAAGCGATGTTCCGGCGTGTGCACCATTATAATACGGAGCCGAATACGATTAAAACGTGGTGCG
GCGCTGCTGTAGACGCGGAGCAGAACCTCGTCAGCAATGACAAAGGATCTGTTGAACTGACCAAAAATGAAATGTTCATT
CTAAAACAATTAATAGAGCAAAAAAACAAGATCGTCAGCCGGGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGACGCCCTGCAGCTTGGCGCATATATCG
AGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAAGTTTTATGATTAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(5-113)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377