Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   QNK08_RS05670 Genome accession   NZ_CP125983
Coordinates   1086518..1087261 (+) Length   247 a.a.
NCBI ID   WP_003233230.1    Uniprot ID   G4NRP4
Organism   Bacillus subtilis strain ZKY04     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1081518..1092261
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNK08_RS05635 (QNK08_05640) yhaI 1081844..1082185 (+) 342 WP_033881416.1 YhaI family protein -
  QNK08_RS05640 (QNK08_05645) scoC 1082182..1082793 (-) 612 WP_003239501.1 HTH-type transcriptional regulator Hpr -
  QNK08_RS05645 (QNK08_05650) yhaH 1082972..1083328 (-) 357 WP_003245875.1 YtxH domain-containing protein -
  QNK08_RS05650 (QNK08_05655) - 1083458..1083649 (+) 192 WP_003233238.1 hypothetical protein -
  QNK08_RS05655 (QNK08_05660) trpP 1083724..1084242 (-) 519 WP_003233236.1 tryptophan transporter TrpP -
  QNK08_RS05660 (QNK08_05665) serC 1084367..1085446 (-) 1080 WP_014479338.1 3-phosphoserine/phosphohydroxythreonine transaminase -
  QNK08_RS05665 (QNK08_05670) hinT 1085593..1086030 (-) 438 WP_003233231.1 HIT family protein -
  QNK08_RS05670 (QNK08_05675) pptA 1086518..1087261 (+) 744 WP_003233230.1 ABC transporter ATP-binding protein EcsA Regulator
  QNK08_RS05675 (QNK08_05680) ecsB 1087254..1088480 (+) 1227 WP_046160231.1 ABC transporter permease EcsB -
  QNK08_RS05680 (QNK08_05685) ecsC 1088500..1089210 (+) 711 WP_046160232.1 EcsC family protein -
  QNK08_RS05685 (QNK08_05690) sndC 1089228..1090418 (-) 1191 WP_069837400.1 N-acetyl amino acid acetylase SndC -
  QNK08_RS05690 (QNK08_05695) - 1090491..1091882 (-) 1392 WP_080478402.1 hypothetical protein -

Sequence

Protein


Download         Length: 247 a.a.        Molecular weight: 27722.20 Da        Isoelectric Point: 5.9114

>NTDB_id=765952 QNK08_RS05670 WP_003233230.1 1086518..1087261(+) (pptA) [Bacillus subtilis strain ZKY04]
MSLLSVKDLTGGYTRNPVLKNVSFTLEPNQIVGLIGLNGAGKSTTIRHIIGLMDPHKGSIELNGKTFAEDPEGYRSQFTY
IPETPVLYEELTLMEHLELTAMAYGLSKETMEKRLPPLLKEFRMEKRLKWFPAHFSKGMKQKVMIMCAFLAEPALYIIDE
PFLGLDPLAINALLERMNEAKKGGASVLMSTHILATAERYCDSFIILHNGEVRARGTLSELREQFGMKDAALDDLYLELT
KEDAGHE

Nucleotide


Download         Length: 744 bp        

>NTDB_id=765952 QNK08_RS05670 WP_003233230.1 1086518..1087261(+) (pptA) [Bacillus subtilis strain ZKY04]
ATGTCTCTGCTATCGGTAAAAGACTTGACCGGCGGATATACAAGGAATCCGGTTTTAAAAAACGTATCATTCACCCTTGA
ACCGAATCAAATTGTCGGATTAATCGGGCTGAATGGTGCTGGTAAAAGTACAACAATCAGACACATCATCGGGCTGATGG
ACCCGCATAAAGGTTCAATCGAATTAAACGGTAAAACGTTTGCTGAGGATCCGGAAGGCTACCGTTCACAATTTACCTAT
ATACCTGAAACACCTGTTTTATACGAAGAATTGACGCTGATGGAGCATCTTGAACTAACAGCCATGGCATATGGACTGTC
AAAAGAAACGATGGAGAAAAGGCTGCCTCCGCTACTAAAGGAATTCCGAATGGAAAAGAGGCTGAAGTGGTTCCCGGCCC
ATTTTTCTAAAGGAATGAAGCAGAAGGTTATGATTATGTGCGCATTTTTGGCAGAGCCTGCGCTCTACATTATTGATGAG
CCTTTTCTAGGGCTTGATCCGCTTGCCATTAACGCGCTGCTTGAACGGATGAATGAAGCGAAAAAAGGCGGGGCGAGCGT
GCTGATGTCAACACACATTTTGGCAACGGCAGAACGCTATTGCGATTCGTTTATTATTTTACATAACGGCGAGGTGCGGG
CGCGCGGCACGCTGTCAGAGCTCAGAGAGCAGTTTGGAATGAAGGACGCGGCGCTGGACGATTTGTATCTTGAGCTTACA
AAGGAAGACGCTGGCCATGAATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-162)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NRP4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

56.904

96.761

0.551
  pptA Streptococcus thermophilus LMD-9

56.485

96.761

0.547