Detailed information NTG0765940

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: QNK08_RS02845
• Genome accession: NZ_CP125983
• Coordinates: 539289..540434 (+)
• Length: 381 a.a.
• NCBI ID: WP_155118109.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain ZKY04
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 534289..545434

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QNK08_RS02820 (QNK08_02835)	-	534301..535548 (+)	1248	WP_031600262.1	IS256-like element ISBsu2 family transposase	-
QNK08_RS02825 (QNK08_02840)	-	535571..537115 (+)	1545	Protein_508	CD3337/EF1877 family mobilome membrane protein	-
QNK08_RS02830 (QNK08_02845)	-	537112..538101 (+)	990	WP_259607224.1	lysozyme family protein	-
QNK08_RS02835 (QNK08_02850)	-	538116..538622 (+)	507	WP_069964002.1	hypothetical protein	-
QNK08_RS02840 (QNK08_02855)	-	538685..539071 (+)	387	WP_396127098.1	cystatin-like fold lipoprotein	-
QNK08_RS02845 (QNK08_02860)	rapF	539289..540434 (+)	1146	WP_155118109.1	tetratricopeptide repeat protein	Regulator
QNK08_RS02850 (QNK08_02865)	-	540593..541684 (-)	1092	WP_069964004.1	DNA cytosine methyltransferase	-
QNK08_RS02855 (QNK08_02870)	-	541739..543073 (-)	1335	WP_196219418.1	LlaJI family restriction endonuclease	-
QNK08_RS02860 (QNK08_02875)	-	543073..544803 (-)	1731	WP_069964006.1	AAA family ATPase	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45266.84 Da
• Isoelectric Point: 5.4113

>NTDB_id=765940 QNK08_RS02845 WP_155118109.1 539289..540434(+) (rapF) [Bacillus subtilis strain ZKY04]
MEPVFLMKGKIPYDLVTKKLNAWYTAIKNDRVEQAENIKQEVEMELKSIEENQDALLYYQLLEFRHEIMLSYMESKRIDN
LTSTYETIKEIEEQGQLTGMLEYYFYFFKGMYEFRRKELTTAISAYRVAETKLSEVEDEIEKAEFFFKVSYVYYYMKQTY
FSMNYANRALNIFKDYDEYAVQTIRCQFIVAGNYIDSMEFEKALNVFFNSLDVAKSINSDHLIGMSHINIGICFDELKQY
EDAATHLEISLKLLEKKNNSFLPKALFILTHVKAKQNDLKASLTYFKKGRFYSKINKDLEYDAKFKILEGLYFSNGEYQL
IEDAFAYLESKKMFADVENYAIDVGDFFHERGKLLLSNEYYRMSIEARRKIKKGEIKHENL

Nucleotide

• Length: 1146 bp

>NTDB_id=765940 QNK08_RS02845 WP_155118109.1 539289..540434(+) (rapF) [Bacillus subtilis strain ZKY04]
GTGGAGCCGGTTTTCTTGATGAAGGGGAAGATTCCATATGATCTTGTTACTAAAAAATTAAATGCTTGGTATACAGCGAT
CAAAAACGATCGTGTGGAACAAGCGGAAAATATTAAACAAGAAGTAGAAATGGAGCTAAAAAGTATTGAAGAAAATCAAG
ATGCTTTGTTGTATTATCAGTTATTAGAATTTAGACATGAAATAATGTTGAGTTATATGGAATCAAAAAGAATTGACAAT
CTGACAAGTACTTATGAAACAATTAAGGAGATAGAAGAGCAAGGGCAATTGACAGGTATGCTTGAATATTATTTCTATTT
TTTTAAGGGGATGTATGAGTTCAGGAGAAAAGAGTTAACAACAGCGATCAGTGCTTACAGAGTAGCTGAAACTAAGTTAT
CGGAGGTAGAGGATGAGATAGAGAAAGCTGAATTTTTCTTTAAGGTGTCGTATGTTTACTATTATATGAAGCAAACTTAC
TTCTCAATGAATTATGCAAATCGAGCACTTAACATATTTAAAGATTATGATGAATATGCTGTTCAAACAATTCGGTGTCA
GTTTATTGTTGCAGGCAATTATATTGATTCGATGGAATTTGAAAAGGCCCTCAATGTCTTTTTTAATTCACTTGACGTTG
CAAAAAGTATAAATAGTGATCATCTAATTGGGATGTCTCATATAAATATTGGCATCTGTTTTGATGAGTTAAAGCAATAT
GAAGATGCAGCGACTCATTTAGAAATATCCTTGAAATTGCTTGAAAAGAAAAATAATTCATTTTTACCAAAGGCTTTGTT
TATTTTGACACATGTGAAGGCAAAACAGAACGATTTAAAAGCATCTTTAACATATTTTAAAAAAGGTCGATTCTATTCAA
AAATAAATAAAGATCTTGAATATGATGCAAAATTTAAAATCTTAGAAGGACTTTACTTTTCTAATGGTGAATATCAACTC
ATAGAAGATGCATTTGCATATCTTGAATCGAAAAAGATGTTTGCTGATGTTGAAAATTATGCAATTGATGTGGGTGATTT
TTTTCATGAACGAGGAAAATTATTACTGTCTAATGAATATTATCGTATGAGTATTGAAGCAAGACGTAAAATCAAAAAAG
GAGAGATTAAACATGAAAATTTGTAG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (10-70)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	38.133	98.425	0.375
rapC	Bacillus subtilis subsp. subtilis str. 168	37.234	98.688	0.367