Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   O3S70_RS20525 Genome accession   NZ_CP114399
Coordinates   3985884..3986060 (-) Length   58 a.a.
NCBI ID   WP_001003335.1    Uniprot ID   A0A9W5VN58
Organism   Bacillus thuringiensis serovar tenebrionis strain NB176-1     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 3980884..3991060
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  O3S70_RS20505 - 3981664..3982410 (-) 747 WP_000966119.1 YjbA family protein -
  O3S70_RS20510 - 3982554..3983342 (-) 789 WP_000538198.1 DUF2268 domain-containing putative Zn-dependent protease -
  O3S70_RS20515 fabF 3983450..3984688 (-) 1239 WP_000412645.1 beta-ketoacyl-ACP synthase II -
  O3S70_RS20520 fabH 3984720..3985652 (-) 933 WP_001100533.1 beta-ketoacyl-ACP synthase III -
  O3S70_RS20525 comZ 3985884..3986060 (-) 177 WP_001003335.1 ComZ family protein Regulator
  O3S70_RS20530 - 3986115..3986987 (-) 873 WP_000486171.1 NAD(P)-dependent oxidoreductase -
  O3S70_RS20535 - 3987017..3987751 (-) 735 WP_000028706.1 hypothetical protein -
  O3S70_RS20540 - 3987908..3988090 (+) 183 WP_001211116.1 YjzD family protein -
  O3S70_RS20545 clpC 3988129..3990729 (-) 2601 WP_000365378.1 ATP-dependent chaperone ClpB Regulator

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6575.71 Da        Isoelectric Point: 4.4184

>NTDB_id=765896 O3S70_RS20525 WP_001003335.1 3985884..3986060(-) (comZ) [Bacillus thuringiensis serovar tenebrionis strain NB176-1]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADQQ

Nucleotide


Download         Length: 177 bp        

>NTDB_id=765896 O3S70_RS20525 WP_001003335.1 3985884..3986060(-) (comZ) [Bacillus thuringiensis serovar tenebrionis strain NB176-1]
ATGAACGAAAAAAGCATGCAGTTTTTACAAATCGCAATGAAGCATTTACCAGAAGCAAAGGCCATTTTAGATGATAATGG
AATTGCGCTTGATATGGAGAAAGCACAACCAGTATTAGAGTTATTGATGAAAGTTATGAACGAAGCATATGAGCTTGGGA
AAGCAGATCAACAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586