Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   O3S72_RS20520 Genome accession   NZ_CP114392
Coordinates   3984884..3985060 (-) Length   58 a.a.
NCBI ID   WP_001003335.1    Uniprot ID   A0A9W5VN58
Organism   Bacillus thuringiensis serovar tenebrionis strain NB125     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 3979884..3990060
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  O3S72_RS20500 - 3980664..3981410 (-) 747 WP_000966119.1 YjbA family protein -
  O3S72_RS20505 - 3981554..3982342 (-) 789 WP_000538198.1 DUF2268 domain-containing putative Zn-dependent protease -
  O3S72_RS20510 fabF 3982450..3983688 (-) 1239 WP_000412645.1 beta-ketoacyl-ACP synthase II -
  O3S72_RS20515 fabH 3983720..3984652 (-) 933 WP_001100533.1 beta-ketoacyl-ACP synthase III -
  O3S72_RS20520 comZ 3984884..3985060 (-) 177 WP_001003335.1 ComZ family protein Regulator
  O3S72_RS20525 - 3985115..3985987 (-) 873 WP_000486171.1 NAD(P)-dependent oxidoreductase -
  O3S72_RS20530 - 3986017..3986751 (-) 735 WP_000028706.1 hypothetical protein -
  O3S72_RS20535 - 3986908..3987090 (+) 183 WP_001211116.1 YjzD family protein -
  O3S72_RS20540 clpC 3987129..3989729 (-) 2601 WP_000365378.1 ATP-dependent chaperone ClpB Regulator

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6575.71 Da        Isoelectric Point: 4.4184

>NTDB_id=765848 O3S72_RS20520 WP_001003335.1 3984884..3985060(-) (comZ) [Bacillus thuringiensis serovar tenebrionis strain NB125]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADQQ

Nucleotide


Download         Length: 177 bp        

>NTDB_id=765848 O3S72_RS20520 WP_001003335.1 3984884..3985060(-) (comZ) [Bacillus thuringiensis serovar tenebrionis strain NB125]
ATGAACGAAAAAAGCATGCAGTTTTTACAAATCGCAATGAAGCATTTACCAGAAGCAAAGGCCATTTTAGATGATAATGG
AATTGCGCTTGATATGGAGAAAGCACAACCAGTATTAGAGTTATTGATGAAAGTTATGAACGAAGCATATGAGCTTGGGA
AAGCAGATCAACAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586