Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   QNK07_RS16455 Genome accession   NZ_CP125981
Coordinates   3149529..3150392 (-) Length   287 a.a.
NCBI ID   WP_032722437.1    Uniprot ID   -
Organism   Bacillus subtilis strain ZKY06     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 3144529..3155392
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNK07_RS16420 (QNK07_16440) mrpE 3144697..3145173 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  QNK07_RS16425 (QNK07_16445) mrpF 3145173..3145457 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  QNK07_RS16430 (QNK07_16450) mnhG 3145441..3145815 (+) 375 WP_003244302.1 monovalent cation/H(+) antiporter subunit G -
  QNK07_RS16435 (QNK07_16455) yuxO 3145854..3146234 (-) 381 WP_017695528.1 hotdog fold thioesterase -
  QNK07_RS16440 (QNK07_16460) comA 3146253..3146897 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  QNK07_RS16445 (QNK07_16465) comP 3146978..3149290 (-) 2313 WP_032722435.1 histidine kinase Regulator
  QNK07_RS16450 (QNK07_16470) comX 3149306..3149527 (-) 222 WP_014480704.1 competence pheromone ComX -
  QNK07_RS16455 (QNK07_16475) comQ 3149529..3150392 (-) 864 WP_032722437.1 polyprenyl synthetase family protein Regulator
  QNK07_RS16460 (QNK07_16480) degQ 3150577..3150717 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  QNK07_RS16465 (QNK07_16485) - 3150939..3151064 (+) 126 WP_003228793.1 hypothetical protein -
  QNK07_RS16470 (QNK07_16490) - 3151178..3151546 (+) 369 WP_014477834.1 hypothetical protein -
  QNK07_RS16475 (QNK07_16495) pdeH 3151522..3152751 (-) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -
  QNK07_RS16480 (QNK07_16500) pncB 3152888..3154360 (-) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -
  QNK07_RS16485 (QNK07_16505) pncA 3154376..3154927 (-) 552 WP_014477836.1 cysteine hydrolase family protein -

Sequence


Protein


Download         Length: 287 a.a.        Molecular weight: 32833.50 Da        Isoelectric Point: 5.2201

>NTDB_id=765741 QNK07_RS16455 WP_032722437.1 3149529..3150392(-) (comQ) [Bacillus subtilis strain ZKY06]
MKEIVDENILNEDLKVKLISFIKEKKQFSFAELAYYHYIAFDGKNDKAIELLASGIELLILSADIFDDIEDKDNLQASWM
KLDPSIATNAATALYTLSLQVIGSVSNHPKLLSLTLQYSLQSLQGQHVDLNLTASSESEYIEMIKLKSGSLVTLPSILGV
YLATGEYNETVEEYSRYLGIVEQIANDHYGLYYPNNNDFKTRHTLAFNYLKNKFNQSSIDLLNFYAQENHMINNLEDLKG
KLRESGVIQYLNVIKNLAVENFKESFKKLRLDEQRKNKLLIQLLRGI

Nucleotide


Download         Length: 864 bp        

>NTDB_id=765741 QNK07_RS16455 WP_032722437.1 3149529..3150392(-) (comQ) [Bacillus subtilis strain ZKY06]
ATGAAGGAGATTGTGGATGAAAATATTTTAAATGAGGACTTAAAAGTGAAGCTCATTTCTTTTATCAAAGAAAAAAAACA
ATTTTCATTTGCAGAACTGGCTTATTACCATTACATAGCATTTGATGGAAAAAACGACAAAGCAATTGAGTTATTGGCGT
CAGGTATAGAACTTTTAATTTTATCTGCGGACATTTTTGACGATATTGAGGATAAGGACAATCTTCAGGCTTCTTGGATG
AAATTAGATCCTTCTATAGCAACTAACGCAGCTACCGCACTTTATACATTAAGTCTGCAAGTAATAGGTTCAGTCTCAAA
TCATCCAAAACTTTTAAGCCTTACTTTGCAATATTCACTCCAATCTTTACAAGGACAACATGTAGATTTGAATTTAACAG
CCTCATCAGAATCAGAGTATATTGAAATGATTAAACTTAAGTCGGGTTCTCTGGTAACATTGCCCAGTATTCTTGGTGTA
TATCTGGCAACTGGAGAATATAATGAAACAGTTGAGGAGTATTCACGTTATTTAGGTATAGTCGAGCAAATTGCAAATGA
TCACTATGGACTTTATTACCCTAACAATAATGACTTCAAAACTAGACATACGCTTGCCTTCAATTATCTTAAAAATAAAT
TTAACCAATCATCAATTGACTTATTAAATTTTTATGCGCAAGAAAATCATATGATAAATAATTTGGAAGATTTGAAGGGA
AAGTTAAGAGAATCAGGTGTAATACAATATTTGAATGTTATAAAAAATTTAGCAGTGGAAAATTTTAAGGAATCATTCAA
AAAACTGAGATTAGATGAACAAAGAAAAAATAAATTACTTATTCAATTATTAAGGGGGATTTAA

Domains


Predicted by InterProScan.

(45-194)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

45

97.561

0.439