Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   QNK07_RS15640 Genome accession   NZ_CP125981
Coordinates   3006623..3007318 (-) Length   231 a.a.
NCBI ID   WP_004399109.1    Uniprot ID   O34951
Organism   Bacillus subtilis strain ZKY06     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3001623..3012318
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNK07_RS15620 (QNK07_15645) yttA 3002050..3002796 (+) 747 WP_003229141.1 LMBR1 domain-containing protein -
  QNK07_RS15625 (QNK07_15650) bceB 3002833..3004773 (-) 1941 WP_032722367.1 bacitracin ABC transporter permease BceB -
  QNK07_RS15630 (QNK07_15655) bceA 3004763..3005524 (-) 762 WP_003229137.1 bacitracin ABC transporter ATP-binding protein BceA -
  QNK07_RS15635 (QNK07_15660) bceS 3005626..3006630 (-) 1005 WP_004398652.1 two-component sensor histidine kinase BceS -
  QNK07_RS15640 (QNK07_15665) braR 3006623..3007318 (-) 696 WP_004399109.1 two-component response regulator BceR Regulator
  QNK07_RS15645 (QNK07_15670) ytrF 3007415..3008725 (-) 1311 WP_004398682.1 ABC transporter permease YtrF -
  QNK07_RS15650 (QNK07_15675) ytrE 3008715..3009410 (-) 696 WP_014477726.1 ABC transporter ATP-binding protein YtrE -
  QNK07_RS15655 (QNK07_15680) ytrD 3009425..3010402 (-) 978 WP_032722368.1 ABC transporter permease YtrD -
  QNK07_RS15660 (QNK07_15685) ytrC 3010432..3011418 (-) 987 WP_015714563.1 ABC transporter permease YtrC -
  QNK07_RS15665 (QNK07_15690) ytrB 3011412..3012290 (-) 879 WP_003229123.1 ABC transporter ATP-binding protein YtrB -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26866.74 Da        Isoelectric Point: 5.3731

>NTDB_id=765738 QNK07_RS15640 WP_004399109.1 3006623..3007318(-) (braR) [Bacillus subtilis strain ZKY06]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFAAVNPDCVIIDVQLPKFDGFHWCRLIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNTEPSTIKTWCGAAVDAEQNLVSNDKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDALQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=765738 QNK07_RS15640 WP_004399109.1 3006623..3007318(-) (braR) [Bacillus subtilis strain ZKY06]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTGCGGCGGTTAATCCTGATTGTGTCATTATTGATGTGC
AGCTGCCTAAATTTGACGGCTTTCATTGGTGCCGTCTGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
CGGGATCATCCTGCTGATATGGTGATGTCCATGCAGCTCGGGGCAGATGACTTTATTCAAAAGCCATTTCATTTTGATGT
GCTGATCGCGAAAATCCAAGCGATGTTCCGGCGTGTGCACCATTATAATACGGAGCCGAGTACGATTAAAACGTGGTGCG
GCGCTGCTGTAGACGCGGAGCAGAACCTCGTCAGCAATGACAAAGGATCTGTTGAACTGACCAAAAATGAAATGTTCATT
CTAAAACAATTAATAGAGCAAAAAAACAAGATCGTCAGCCGGGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGACGCCCTGCAGCTTGGTGCATATATCG
AGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAAGTTCTATGATTAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(5-113)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB O34951

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377