Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   QM970_RS18205 Genome accession   NZ_CP125980
Coordinates   3393368..3394081 (-) Length   237 a.a.
NCBI ID   WP_021480675.1    Uniprot ID   -
Organism   Bacillus subtilis strain ZKY03     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3388368..3399081
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QM970_RS18185 (QM970_18190) ghrB 3388513..3389490 (+) 978 WP_072592561.1 2-hydroxyacid dehydrogenase -
  QM970_RS18190 (QM970_18195) psdB 3389527..3391467 (-) 1941 WP_069837800.1 lantibiotic ABC transporter permease PsdB -
  QM970_RS18195 (QM970_18200) psdA 3391442..3392221 (-) 780 WP_069837801.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  QM970_RS18200 (QM970_18205) psdS 3392304..3393374 (-) 1071 WP_021480674.1 two-component sensor histidine kinase PsdS -
  QM970_RS18205 (QM970_18210) braR 3393368..3394081 (-) 714 WP_021480675.1 two-component system response regulator PsdR Regulator
  QM970_RS18210 (QM970_18215) - 3394228..3394436 (+) 209 Protein_3523 hypothetical protein -
  QM970_RS18215 (QM970_18220) yvcN 3394472..3395236 (-) 765 WP_015251150.1 arylamine N-acetyltransferase family protein -
  QM970_RS18220 (QM970_18225) crh 3395237..3395494 (-) 258 WP_003219835.1 HPr family phosphocarrier protein -
  QM970_RS18225 (QM970_18230) whiA 3395518..3396468 (-) 951 WP_003228147.1 DNA-binding protein WhiA -
  QM970_RS18230 (QM970_18235) mgfK 3396491..3397444 (-) 954 WP_003244450.1 gluconeogenesis morphogenetic factor -
  QM970_RS18235 (QM970_18240) rapZ 3397446..3398333 (-) 888 WP_003243903.1 RNase adapter RapZ -
  QM970_RS18240 (QM970_18245) rppI 3398358..3398834 (-) 477 WP_014481002.1 8-oxo-dGTP diphosphatase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27544.41 Da        Isoelectric Point: 4.6062

>NTDB_id=765598 QM970_RS18205 WP_021480675.1 3393368..3394081(-) (braR) [Bacillus subtilis strain ZKY03]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNTPIIFISA
RTDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRIVELGGLTIYPDQNEAEWNSVRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLTDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=765598 QM970_RS18205 WP_021480675.1 3393368..3394081(-) (braR) [Bacillus subtilis strain ZKY03]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGACCTTGTGCTGCTTGATATCA
ACCTGCCTTTTTTTGACGGGTTTTATTGGTGCAGGCAAATCCGTACCATTTCCAATACGCCGATTATCTTTATATCGGCA
CGGACCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAGCCGTTCCATCTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATACTCGCCCTCTTTGCCGCAGGAATCAAGAATAG
TGGAGCTTGGCGGGCTAACGATTTATCCTGATCAAAATGAAGCGGAGTGGAACAGCGTCCGGATTTTGTTTTCCCAAAAA
GAATTCCAGCTTCTCTCGATTTTTGTGAGGGAGCATAAAAAAATTGTCTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAATCGGCTGCGGAGAAAACTGGAGAATGCAGGACTGA
CAGATTGCATTTCCACAATCAGAGGACAAGGCTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAGTGTTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.536

94.515

0.43