Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   QM970_RS15225 Genome accession   NZ_CP125980
Coordinates   2847784..2848479 (-) Length   231 a.a.
NCBI ID   WP_017695455.1    Uniprot ID   -
Organism   Bacillus subtilis strain ZKY03     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2842784..2853479
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QM970_RS15205 (QM970_15220) - 2842863..2844110 (-) 1248 WP_031600262.1 IS256-like element ISBsu2 family transposase -
  QM970_RS15210 (QM970_15225) bceB 2844204..2845934 (-) 1731 Protein_2951 bacitracin ABC transporter permease BceB -
  QM970_RS15215 (QM970_15230) bceA 2845924..2846685 (-) 762 WP_003229137.1 bacitracin ABC transporter ATP-binding protein BceA -
  QM970_RS15220 (QM970_15235) bceS 2846787..2847791 (-) 1005 WP_024573099.1 two-component sensor histidine kinase BceS -
  QM970_RS15225 (QM970_15240) braR 2847784..2848479 (-) 696 WP_017695455.1 two-component response regulator BceR Regulator
  QM970_RS15230 (QM970_15245) ytrF 2848577..2849887 (-) 1311 WP_017695454.1 ABC transporter permease YtrF -
  QM970_RS15235 (QM970_15250) ytrE 2849877..2850572 (-) 696 WP_014477726.1 ABC transporter ATP-binding protein YtrE -
  QM970_RS15240 (QM970_15255) ytrD 2850587..2851564 (-) 978 WP_014480623.1 ABC transporter permease YtrD -
  QM970_RS15245 (QM970_15260) - 2851596..2852582 (-) 987 WP_069964267.1 ABC transporter permease subunit -
  QM970_RS15250 (QM970_15265) ytrB 2852576..2853454 (-) 879 WP_003229123.1 ABC transporter ATP-binding protein YtrB -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26907.80 Da        Isoelectric Point: 5.3775

>NTDB_id=765588 QM970_RS15225 WP_017695455.1 2847784..2848479(-) (braR) [Bacillus subtilis strain ZKY03]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFAAVNPDCVIIDVQLPKFDGFHWCRLIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFEVLIAKIQAMFRRVHHYNTEPNTIKTWCGAAVDAEQNLVSNDKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDALQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=765588 QM970_RS15225 WP_017695455.1 2847784..2848479(-) (braR) [Bacillus subtilis strain ZKY03]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCACTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTGCGGCGGTTAATCCTGATTGTGTCATTATTGATGTAC
AGCTGCCTAAATTTGACGGTTTTCATTGGTGCCGGCTGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
CGGGATCATCCTGCTGATATGGTGATGTCCATGCAGCTCGGGGCAGATGACTTTATTCAAAAGCCATTTCATTTTGAAGT
GCTGATCGCGAAAATCCAAGCGATGTTCCGGCGTGTGCACCATTATAATACGGAGCCGAATACGATTAAAACGTGGTGCG
GCGCTGCTGTAGACGCGGAGCAGAACCTCGTCAGCAATGACAAAGGATCTGTTGAACTGACCAAAAATGAAATGTTCATT
CTAAAACAATTAATAGAGCAAAAAAACAAGATCGTCAGCCGGGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGACGCCCTGCAGCTTGGCGCATATATCG
AGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAAGTTTTATGATTAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(5-113)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377