Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | H7K53_RS17355 | Genome accession | NZ_AP022077 |
| Coordinates | 3577246..3577671 (-) | Length | 141 a.a. |
| NCBI ID | WP_000788337.1 | Uniprot ID | A0A009SG52 |
| Organism | Acinetobacter baumannii strain WP4-W18-ESBL-11 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 3572246..3582671
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H7K53_RS17325 (WP4W18E11_33910) | - | 3572778..3573809 (+) | 1032 | WP_001189457.1 | lipase secretion chaperone | - |
| H7K53_RS17330 (WP4W18E11_33920) | - | 3573924..3574865 (+) | 942 | WP_086321537.1 | triacylglycerol lipase | - |
| H7K53_RS17335 (WP4W18E11_33930) | rplS | 3574918..3575286 (-) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| H7K53_RS17340 (WP4W18E11_33940) | trmD | 3575494..3576234 (-) | 741 | WP_000464599.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| H7K53_RS17345 (WP4W18E11_33950) | rimM | 3576280..3576828 (-) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| H7K53_RS17350 (WP4W18E11_33960) | rpsP | 3576848..3577099 (-) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| H7K53_RS17355 (WP4W18E11_33970) | pilE | 3577246..3577671 (-) | 426 | WP_000788337.1 | type IV pilin protein | Machinery gene |
| H7K53_RS17360 (WP4W18E11_33980) | pilY2 | 3577668..3578150 (-) | 483 | WP_001046423.1 | type IV pilin protein | Machinery gene |
| H7K53_RS17365 (WP4W18E11_33990) | pilY1 | 3578163..3582017 (-) | 3855 | WP_000768954.1 | PilC/PilY family type IV pilus protein | Machinery gene |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15163.36 Da Isoelectric Point: 7.8144
>NTDB_id=76543 H7K53_RS17355 WP_000788337.1 3577246..3577671(-) (pilE) [Acinetobacter baumannii strain WP4-W18-ESBL-11]
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKIVNNRYPSDATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKIVNNRYPSDATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=76543 H7K53_RS17355 WP_000788337.1 3577246..3577671(-) (pilE) [Acinetobacter baumannii strain WP4-W18-ESBL-11]
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTCGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACATTAGAATCTC
AAAAAATAGTAAATAACCGTTATCCTTCGGATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTAAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCATTAT
CTGCTTCATCGAGTTGGACCGAGTAA
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTCGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACATTAGAATCTC
AAAAAATAGTAAATAACCGTTATCCTTCGGATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTAAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCATTAT
CTGCTTCATCGAGTTGGACCGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
90.78 |
100 |
0.908 |
| comF | Acinetobacter baylyi ADP1 |
50 |
99.291 |
0.496 |