Detailed information    

insolico Bioinformatically predicted

Overview

Name   agrA   Type   Regulator
Locus tag   QM338_RS10280 Genome accession   NZ_CP125901
Coordinates   2058594..2059310 (+) Length   238 a.a.
NCBI ID   WP_000688492.1    Uniprot ID   P0A0I7
Organism   Staphylococcus aureus strain CHAL2     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2053594..2064310
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QM338_RS10250 (QM338_10250) - 2053811..2054437 (+) 627 WP_000522381.1 nitroreductase family protein -
  QM338_RS10255 (QM338_10255) - 2054798..2055583 (+) 786 WP_000867951.1 carbon-nitrogen family hydrolase -
  QM338_RS10260 (QM338_10260) - 2056183..2056317 (-) 135 WP_001549197.1 delta-lysin family phenol-soluble modulin -
  QM338_RS10265 (QM338_10265) - 2056553..2057116 (+) 564 WP_001105696.1 accessory gene regulator ArgB-like protein -
  QM338_RS10270 (QM338_10270) agrD 2057119..2057262 (+) 144 WP_001094921.1 cyclic lactone autoinducer peptide AgrD -
  QM338_RS10275 (QM338_10275) agrC 2057292..2058575 (+) 1284 WP_000447888.1 quorum-sensing sensor histidine kinase AgrC -
  QM338_RS10280 (QM338_10280) agrA 2058594..2059310 (+) 717 WP_000688492.1 quorum-sensing response regulator AgrA Regulator
  QM338_RS10285 (QM338_10285) - 2059382..2059491 (+) 110 Protein_1990 hypothetical protein -
  QM338_RS10290 (QM338_10290) - 2059679..2060638 (-) 960 WP_001253312.1 carbohydrate kinase -
  QM338_RS10295 (QM338_10295) - 2060635..2062119 (-) 1485 WP_000141432.1 glycoside hydrolase family 32 protein -
  QM338_RS10300 (QM338_10300) - 2062268..2063218 (-) 951 WP_000790331.1 LacI family DNA-binding transcriptional regulator -

Sequence

Protein


Download         Length: 238 a.a.        Molecular weight: 27905.90 Da        Isoelectric Point: 6.0927

>NTDB_id=765331 QM338_RS10280 WP_000688492.1 2058594..2059310(+) (agrA) [Staphylococcus aureus strain CHAL2]
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIM
FFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI

Nucleotide


Download         Length: 717 bp        

>NTDB_id=765331 QM338_RS10280 WP_000688492.1 2058594..2059310(+) (agrA) [Staphylococcus aureus strain CHAL2]
ATGAAAATTTTCATTTGCGAAGACGATCCAAAACAAAGAGAAAACATGGTTACCATTATTAAAAATTATATAATGATAGA
AGAAAAGCCTATGGAAATTGCCCTCGCAACTGATAATCCTTATGAGGTGCTTGAGCAAGCTAAAAATATGAATGACATAG
GCTGTTACTTTTTAGATATTCAACTTTCAACTGATATTAATGGTATCAAATTAGGCAGTGAAATTCGTAAGCATGACCCA
GTTGGTAACATTATTTTCGTTACGAGTCACAGTGAACTTACCTATTTAACATTTGTCTACAAAGTTGCAGCGATGGATTT
TATTTTTAAAGATGATCCAGCAGAATTAAGAACTCGAATTATAGATTGTTTAGAAACTGCACATACACGCTTACAATTGT
TGTCTAAAGATAATAGCGTTGAAACGATTGAATTAAAACGTGGCAGTAATTCAGTGTATGTTCAATATGATGATATTATG
TTTTTTGAATCATCAACAAAATCTCACAGACTCATTGCCCATTTAGATAACCGTCAAATTGAATTTTATGGTAATTTAAA
AGAACTGAGTCAATTAGATGATCGTTTCTTTAGATGTCATAATAGCTTTGTCGTCAATCGCCATAATATTGAATCTATAG
ATTCGAAAGAGCGAATTGTCTATTTTAAAAATAAAGAACACTGCTATGCATCGGTGAGAAACGTTAAAAAAATATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(3-120)

LytTr DNA-binding domain (LytTR)

(151-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  PDB 3BS1
  PDB 4G4K

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

100

100

1