Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   O1449_RS02445 Genome accession   NZ_CP114264
Coordinates   511115..512002 (+) Length   295 a.a.
NCBI ID   WP_269228818.1    Uniprot ID   A0A9E9L5Q0
Organism   Acinetobacter sp. TR3     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 506115..517002
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  O1449_RS02415 (O1449_02415) - 506168..506677 (-) 510 WP_018677325.1 dihydrofolate reductase -
  O1449_RS02420 (O1449_02420) thyA 506699..507541 (-) 843 WP_046738249.1 thymidylate synthase -
  O1449_RS02425 (O1449_02425) - 507713..508537 (+) 825 WP_269228820.1 YwqG family protein -
  O1449_RS02430 (O1449_02430) - 508583..509158 (-) 576 WP_269228819.1 xanthine phosphoribosyltransferase -
  O1449_RS02435 (O1449_02435) - 509247..509891 (-) 645 WP_269230474.1 DUF3108 domain-containing protein -
  O1449_RS02440 (O1449_02440) - 510147..510827 (-) 681 WP_269239067.1 hypothetical protein -
  O1449_RS02445 (O1449_02445) tonB2 511115..512002 (+) 888 WP_269228818.1 TonB family protein Machinery gene
  O1449_RS02450 (O1449_02450) - 512282..514474 (+) 2193 WP_269239068.1 TonB-dependent siderophore receptor -
  O1449_RS02455 (O1449_02455) - 514547..514846 (-) 300 WP_269239069.1 antibiotic biosynthesis monooxygenase -
  O1449_RS02460 (O1449_02460) ybeY 514858..515343 (-) 486 WP_087537278.1 rRNA maturation RNase YbeY -
  O1449_RS02465 (O1449_02465) - 515416..516492 (-) 1077 WP_005218240.1 PhoH family protein -

Sequence

Protein


Download         Length: 295 a.a.        Molecular weight: 33619.21 Da        Isoelectric Point: 7.5185

>NTDB_id=765290 O1449_RS02445 WP_269228818.1 511115..512002(+) (tonB2) [Acinetobacter sp. TR3]
MWNKRNFRSVLSPYWWQDPIFIGAVALAMLLHGAVLAIQFAMPSPTDTSTKEIAVTVRTSQEKVKDADFLAQADQKGSGD
FREAHRMSSDMPAPMEADATTGESELESLEKVQQKRELKFEEKVLMTVLSWQKQAEQTERKKTLDELQSQFQAKAAMVAS
LEAQYLQHQQNFSRKQRIKTVDGIQAKQDASAAYLDKFRQKVELYGNRYYPDEAKQRHLSGEVRLMVILNAEGGIRAIRL
IESSGHPILDEAAKASVRRGAPFGPFDNNMKKDISELRIIRTWRFDPVDAEFEVH

Nucleotide


Download         Length: 888 bp        

>NTDB_id=765290 O1449_RS02445 WP_269228818.1 511115..512002(+) (tonB2) [Acinetobacter sp. TR3]
ATGTGGAATAAAAGAAATTTTCGTTCAGTACTGTCCCCTTACTGGTGGCAAGATCCAATTTTTATCGGGGCAGTTGCGTT
AGCGATGCTTCTACATGGTGCTGTGCTTGCAATTCAGTTCGCAATGCCATCACCTACAGATACATCAACCAAAGAAATCG
CAGTTACGGTTCGTACAAGTCAAGAAAAAGTCAAAGATGCCGACTTCTTGGCGCAAGCTGATCAAAAAGGTTCAGGTGAT
TTTCGTGAAGCACATCGTATGTCGAGTGATATGCCAGCTCCGATGGAAGCAGATGCGACAACAGGAGAGTCAGAGCTCGA
GAGTTTAGAGAAAGTCCAGCAAAAACGAGAATTAAAATTTGAAGAAAAAGTGCTCATGACGGTTTTAAGCTGGCAGAAGC
AAGCAGAGCAAACTGAACGTAAAAAAACCTTAGATGAGTTACAGAGTCAATTTCAAGCCAAAGCCGCGATGGTTGCGAGC
TTGGAAGCACAATATTTACAACATCAGCAAAATTTTAGTCGTAAACAACGTATTAAAACAGTAGATGGGATTCAGGCAAA
ACAAGATGCATCAGCAGCTTATCTTGATAAATTTCGTCAGAAAGTTGAACTATATGGTAATCGTTATTATCCAGATGAAG
CGAAACAACGACATTTATCGGGTGAAGTGCGTTTAATGGTCATTCTGAATGCCGAAGGTGGAATTCGAGCAATTCGTCTT
ATAGAAAGTTCTGGACATCCCATTTTAGATGAAGCGGCAAAAGCTTCGGTGCGCCGTGGAGCACCTTTTGGACCCTTTGA
TAACAATATGAAAAAGGACATTTCTGAATTACGAATTATTCGAACATGGCGCTTTGATCCTGTCGATGCGGAATTTGAAG
TACATTAA

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(207-273)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

76.61

100

0.766