Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   QM339_RS03170 Genome accession   NZ_CP125899
Coordinates   666451..667125 (+) Length   224 a.a.
NCBI ID   WP_001166504.1    Uniprot ID   -
Organism   Staphylococcus aureus strain CHAL3     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 661451..672125
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QM339_RS03145 (QM339_03145) - 661664..662731 (+) 1068 WP_000980142.1 membrane protein -
  QM339_RS03150 (QM339_03150) - 662882..663925 (+) 1044 WP_283502311.1 alpha/beta hydrolase -
  QM339_RS03155 (QM339_03155) - 664254..664682 (+) 429 WP_000198504.1 hypothetical protein -
  QM339_RS03160 (QM339_03160) - 664893..665399 (-) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  QM339_RS03165 (QM339_03165) graX 665512..666435 (+) 924 WP_000802948.1 auxiliary protein GraX/ApsX -
  QM339_RS03170 (QM339_03170) braR 666451..667125 (+) 675 WP_001166504.1 response regulator transcription factor GraR/ApsR Regulator
  QM339_RS03175 (QM339_03175) graS 667118..668158 (+) 1041 WP_001061270.1 histidine kinase GraS/ApsS -
  QM339_RS03180 (QM339_03180) vraF 668305..669066 (+) 762 WP_000153733.1 ABC transporter ATP-binding protein VraF -
  QM339_RS03185 (QM339_03185) - 669056..670945 (+) 1890 WP_000009403.1 ABC transporter permease -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 26034.86 Da        Isoelectric Point: 4.3968

>NTDB_id=765174 QM339_RS03170 WP_001166504.1 666451..667125(+) (braR) [Staphylococcus aureus strain CHAL3]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGDQTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEIGMDSAVETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=765174 QM339_RS03170 WP_001166504.1 666451..667125(+) (braR) [Staphylococcus aureus strain CHAL3]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAGCCTTTTTATACAAATGTATT
AATTGCTAAATTACAAGCGATTTATCGCCGAGTGTATGAATTTACTGCTGAAGAAAAACGTACATTGACTTGGCAAGATG
CTGTCGTTGATCTATCAAAAGATAGTATACAAAAAGGTGATCAGACGATTTTTCTATCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACTAAAAAAAATCAAATCGTTTCTAGAGATACAATTATTACTGCGCTATGGGATGATGAAGCATTTGT
CAGTGATAACACATTAACAGTTAATGTGAACCGATTACGTAAGAAACTATCTGAAATAGGGATGGACAGCGCAGTTGAAA
CAAAAGTAGGAAAAGGATATATGGCACATGAATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(148-221)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.909

98.214

0.402