Detailed information NTG0076508

Bioinformatically predicted

Overview

• Name: cinA
• Type: Machinery gene
• Locus tag: LPC25_RS06010
• Genome accession: NZ_AP025176
• Coordinates: 1258448..1259599 (+)
• Length: 383 a.a.
• NCBI ID: WP_000020346.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain TPS5614
• Function: unknown (predicted from homology) Unclear

Genomic Context

Location: 1253448..1264599

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LPC25_RS05985 (TPS5614TP_11370)	yfmH	1254278..1255564 (+)	1287	WP_000664770.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
LPC25_RS05990 (TPS5614TP_11380)	ymfI	1255564..1256268 (+)	705	WP_000646226.1	elongation factor P 5-aminopentanone reductase	-
LPC25_RS05995 (TPS5614TP_11390)	-	1256373..1257200 (+)	828	WP_000214890.1	YmfK family protein	-
LPC25_RS06000 (TPS5614TP_11400)	-	1257219..1257611 (+)	393	WP_000859443.1	helix-turn-helix domain-containing protein	-
LPC25_RS06005 (TPS5614TP_11410)	pgsA	1257645..1258223 (+)	579	WP_001025093.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
LPC25_RS06010 (TPS5614TP_11420)	cinA	1258448..1259599 (+)	1152	WP_000020346.1	CinA family nicotinamide mononucleotide deamidase-related protein	Machinery gene
LPC25_RS06015 (TPS5614TP_11430)	recA	1259764..1260807 (+)	1044	WP_000368167.1	recombinase RecA	-
LPC25_RS06020 (TPS5614TP_11440)	rny	1261161..1262720 (+)	1560	WP_001050913.1	ribonuclease Y	-
LPC25_RS06025	-	1262974..1263962 (-)	989	Protein_1184	transposase	-
LPC25_RS06030 (TPS5614TP_11470)	-	1264249..1264464 (-)	216	WP_000026308.1	hypothetical protein	-

Sequence

Protein

• Length: 383 a.a.
• Molecular weight: 43237.52 Da
• Isoelectric Point: 6.1914

>NTDB_id=76508 LPC25_RS06010 WP_000020346.1 1258448..1259599(+) (cinA) [Staphylococcus aureus strain TPS5614]
MSIAIIAVGSELLLGQIANTNGQFLSKVFNEIGQNVLEHKVIGDNKKRLESSVRHALEKYDTVILTGGLGPTKDDLTKHT
VAQIVGKDLVIDEPSLKYIESYFEEQGQEMTPNNKQQALVIEGSTVLANHHGMAPGMMVNFENKQIILLPGPPKEMQPMV
KNELLSHFINHNRIIHSELLRFAGIGESKVETILIDLIDKQTNPTIAPLAGSHEVYIRLTANADSKEQAQSLIQPVKQEI
LDRIGEYYYGSDDTLIEQAVIKKIHEPFVIYDGITNGALYHRLKEVDLNDVLKGMINHNENFVDINKPIEQQLKDAVQFV
NKLFNVSSAIILLEYDGVVHIGYDNNFEFKTEQFKMSKSRNLLKNRSQNYALIRLLNWLRTTN

Nucleotide

• Length: 1152 bp

>NTDB_id=76508 LPC25_RS06010 WP_000020346.1 1258448..1259599(+) (cinA) [Staphylococcus aureus strain TPS5614]
ATGTCAATTGCCATTATTGCTGTAGGCTCAGAACTATTGCTAGGTCAAATCGCTAATACCAACGGACAATTTCTATCTAA
AGTATTTAATGAAATTGGACAAAATGTATTAGAACATAAAGTTATTGGAGATAATAAAAAACGTTTAGAATCAAGTGTAC
GTCATGCGTTAGAAAAATATGATACTGTTATTTTAACAGGTGGCTTAGGTCCTACGAAAGATGACTTAACGAAGCATACA
GTGGCCCAGATTGTTGGTAAAGATTTAGTTATTGATGAGCCTTCTTTAAAATATATTGAAAGCTATTTTGAGGAACAAGG
ACAAGAAATGACACCTAATAATAAACAACAGGCTTTAGTAATTGAAGGTTCAACTGTATTAGCAAATCATCATGGCATGG
CTCCAGGAATGATGGTGAATTTTGAAAACAAACAAATTATTTTATTACCAGGTCCACCGAAAGAAATGCAACCAATGGTG
AAAAATGAATTGTTGTCACATTTTATAAACCATAATCGAATTATACATTCTGAACTATTAAGATTTGCGGGAATAGGTGA
ATCTAAAGTAGAAACAATATTAATAGATCTTATCGATAAACAGACTAATCCTACGATTGCGCCTTTGGCGGGAAGTCATG
AAGTATATATTAGATTGACTGCAAATGCCGACTCAAAAGAACAAGCACAATCATTGATTCAACCTGTTAAACAAGAAATT
CTTGATCGTATTGGAGAATATTATTATGGTTCAGATGACACATTAATTGAGCAAGCTGTAATAAAGAAAATTCATGAACC
TTTTGTAATATATGATGGTATTACTAATGGTGCTTTATATCATCGATTGAAAGAAGTGGATTTAAACGATGTTCTAAAGG
GTATGATTAATCACAATGAAAACTTTGTTGATATTAATAAACCTATTGAGCAGCAATTAAAAGATGCAGTGCAATTTGTT
AATAAATTGTTTAATGTGTCATCAGCAATTATTCTATTAGAGTATGATGGTGTAGTCCATATAGGCTATGATAATAACTT
TGAATTTAAAACTGAGCAATTTAAAATGTCTAAATCTAGAAATTTATTAAAGAACAGAAGTCAAAATTATGCGCTCATAA
GATTATTAAATTGGCTTAGAACAACAAATTAA

Domains

Predicted by InterProScan.

• Probable molybdopterin binding domain (MoCF_biosynth) (4-164)

• Damage-inducible protein CinA KH domain (CinA_KH) (177-250)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cinA	Bacillus subtilis subsp. subtilis str. 168	40.389	100	0.433