Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   QM342_RS09205 Genome accession   NZ_CP125895
Coordinates   1899062..1899862 (-) Length   266 a.a.
NCBI ID   WP_176432182.1    Uniprot ID   -
Organism   Staphylococcus aureus strain CHAL5     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1894062..1904862
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QM342_RS09185 (QM342_09185) - 1895137..1896114 (+) 978 WP_000379098.1 metal-dependent hydrolase -
  QM342_RS09190 (QM342_09190) - 1896375..1897211 (-) 837 WP_000886465.1 membrane protein -
  QM342_RS09195 (QM342_09195) - 1897220..1898737 (-) 1518 WP_000535829.1 ABC transporter ATP-binding protein -
  QM342_RS09200 (QM342_09200) - 1898752..1899066 (-) 315 WP_000435806.1 YfhH family protein -
  QM342_RS09205 (QM342_09205) recX 1899062..1899862 (-) 801 WP_176432182.1 recombination regulator RecX Regulator
  QM342_RS09210 (QM342_09210) sgtB 1900123..1900932 (-) 810 WP_000830380.1 monofunctional peptidoglycan glycosyltransferase SgtB -
  QM342_RS09215 (QM342_09215) - 1901271..1901786 (-) 516 WP_000163283.1 type 1 glutamine amidotransferase domain-containing protein -
  QM342_RS09220 (QM342_09220) - 1901917..1902078 (-) 162 WP_001005407.1 SE1561 family protein -
  QM342_RS09225 (QM342_09225) yfkAB 1902302..1903453 (+) 1152 WP_049307752.1 radical SAM/CxCxxxxC motif protein YfkAB -
  QM342_RS09230 (QM342_09230) - 1903713..1904243 (-) 531 WP_000184383.1 acyl-CoA thioesterase -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 31600.44 Da        Isoelectric Point: 7.2721

>NTDB_id=765057 QM342_RS09205 WP_176432182.1 1899062..1899862(-) (recX) [Staphylococcus aureus strain CHAL5]
MPKITKIEVQKKNKERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKKRTEKEV
IQYLQKEEISEQAISEVIEYCYREKLIDHQDYAESLKNTMIRTTDKGPKIYQQKLYQLGIEPNIIEMFTELYREQQELDD
IIQIAEKISKTKKGPQNKVKEKVMQSLIQKGFEMETIHAVLNEMDFTQDEAVLDDLLQRDLEKIYNKNRKKYTQQKLISK
TIEGLMRKGYKYDKIKAKLEESGIAD

Nucleotide


Download         Length: 801 bp        

>NTDB_id=765057 QM342_RS09205 WP_176432182.1 1899062..1899862(-) (recX) [Staphylococcus aureus strain CHAL5]
GTGCCGAAGATTACTAAAATAGAAGTTCAAAAGAAAAACAAAGAACGTTTTAATCTTTTTTTAGACGAACAATTTGAAAT
GGGTATAGATATCGATACATTAGTCAAATTTAATTTAAAAAAAGGGCAACAACTTGAAGCTGCTGACATGGCAGAGATTC
AAAAGTATGATCATTATCGCATAGGTTTAAACAAAGCAATCCAATATTTATCATATAAAAAGAGAACTGAAAAAGAAGTT
ATACAATATTTACAAAAAGAAGAGATATCAGAGCAAGCGATTTCTGAAGTGATTGAATATTGTTATCGCGAAAAGTTAAT
CGACCATCAAGATTATGCGGAAAGTTTAAAAAATACAATGATTCGCACGACAGATAAAGGACCTAAAATTTATCAACAAA
AACTATATCAACTTGGTATAGAACCAAATATCATTGAAATGTTTACAGAACTTTATAGAGAACAACAGGAACTTGATGAT
ATTATCCAAATTGCTGAAAAAATATCTAAAACAAAAAAAGGGCCACAAAATAAGGTTAAAGAAAAAGTAATGCAATCTTT
AATTCAAAAAGGGTTTGAAATGGAAACCATTCATGCTGTATTGAATGAAATGGATTTTACACAAGATGAAGCGGTTTTAG
ACGATTTATTACAACGAGATTTAGAAAAAATTTATAATAAAAATCGAAAGAAGTACACGCAACAGAAATTAATTTCAAAA
ACTATCGAAGGCCTTATGAGAAAAGGATATAAATATGATAAAATTAAAGCTAAATTAGAAGAAAGTGGTATTGCCGATTG
A

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(84-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

99.624

100

0.996