Detailed information NTG0764906

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: O2T11_RS01365
• Genome accession: NZ_CP114186
• Coordinates: 296268..297275 (-)
• Length: 335 a.a.
• NCBI ID: WP_005481416.1
• Uniprot ID: A0A072GUT1
• Organism: Vibrio parahaemolyticus strain PH1273
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 291268..302275

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
O2T11_RS01330 (O2T11_01330)	-	291446..291877 (-)	432	WP_017633432.1	DUF2787 family protein	-
O2T11_RS01335 (O2T11_01335)	radC	291874..292347 (-)	474	WP_025792561.1	DNA repair protein RadC	-
O2T11_RS01340 (O2T11_01340)	-	292518..292667 (+)	150	WP_005489496.1	AlpA family phage regulatory protein	-
O2T11_RS01345 (O2T11_01345)	-	292827..293051 (+)	225	WP_005489715.1	hypothetical protein	-
O2T11_RS01350 (O2T11_01350)	hslU	293476..294807 (-)	1332	WP_005489452.1	HslU--HslV peptidase ATPase subunit	-
O2T11_RS01355 (O2T11_01355)	hslV	294831..295382 (-)	552	WP_005489705.1	ATP-dependent protease subunit HslV	-
O2T11_RS01360 (O2T11_01360)	ftsN	295547..296092 (-)	546	WP_005481405.1	cell division protein FtsN	-
O2T11_RS01365 (O2T11_01365)	cytR	296268..297275 (-)	1008	WP_005481416.1	DNA-binding transcriptional regulator CytR	Regulator
O2T11_RS01370 (O2T11_01370)	priA	297608..299812 (-)	2205	WP_283658242.1	primosomal protein N'	-
O2T11_RS01375 (O2T11_01375)	rpmE	300107..300328 (+)	222	WP_005457203.1	50S ribosomal protein L31	-
O2T11_RS01380 (O2T11_01380)	rpsJ	300786..301097 (+)	312	WP_004410492.1	30S ribosomal protein S10	-
O2T11_RS01385 (O2T11_01385)	rplC	301112..301741 (+)	630	WP_005456132.1	50S ribosomal protein L3	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36835.35 Da
• Isoelectric Point: 6.4938

>NTDB_id=764906 O2T11_RS01365 WP_005481416.1 296268..297275(-) (cytR) [Vibrio parahaemolyticus strain PH1273]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEDAVLEAGYSPNSLARNLRRNESKTIVTIVPDICDPYFSEIIRG
IEDAAMEHGYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPDTAVLCQFRQQGYQQALRRAGISKDPQYSVITEFSFDGGAKAVRKLLELPEPPTA
IFCHCDTMAIGAIQEAKRLGLRVPQDLSVVGFDDINFAQYCDPPLTTISQPRYEIGRQAMLMMLELLKGHDVHSGSRLLE
TKLVVRGSAAPPQRA

Nucleotide

• Length: 1008 bp

>NTDB_id=764906 O2T11_RS01365 WP_005481416.1 296268..297275(-) (cytR) [Vibrio parahaemolyticus strain PH1273]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCGGGAGTGTCGACAGCTACGGTATCTCGAGCATTAATGAATCCAGAAAA
AGTCTCTTCTTCAACAAGAAAAAGAGTCGAAGATGCCGTCCTTGAAGCGGGCTATTCTCCAAATTCATTAGCGCGTAATC
TACGTAGAAACGAATCAAAAACGATTGTTACCATCGTTCCTGACATCTGTGATCCTTACTTTTCTGAAATCATTCGTGGT
ATCGAAGACGCCGCTATGGAACATGGCTACCTCGTACTGCTCGGTGACAGCGGCCAGCAGAAAAAGCGTGAAAGCTCGTT
TGTGAATCTAGTGTTCACCAAACAAGCCGATGGCATGTTACTGCTTGGTACCGACCTGCCATTTGATGTCAGCAAGCCAG
AACAGAAAAACCTGCCACCAATGGTCATGGCTTGTGAGTTTGCGCCAGAGCTAGAATTACCAACCGTGCACATTGACAAC
CTAACGTCTGCTTTTGAAGCGGTCAATTACCTAACTCAACTTGGCCATAAACGCATAGCACAAATTTCAGGGCCAGACAC
AGCGGTATTGTGCCAGTTCCGCCAGCAAGGTTATCAACAAGCCTTGCGTCGCGCGGGGATCAGTAAAGACCCACAATACA
GCGTTATCACTGAGTTTTCTTTTGACGGCGGCGCGAAAGCTGTACGTAAGTTGCTAGAACTTCCAGAGCCACCAACTGCG
ATTTTCTGCCACTGCGACACCATGGCAATCGGCGCAATCCAAGAAGCGAAACGACTCGGTCTGCGCGTTCCGCAAGATCT
GTCAGTGGTTGGTTTCGATGATATCAACTTTGCTCAATACTGCGATCCACCGTTAACGACCATTTCTCAACCTCGTTATG
AAATTGGCCGCCAAGCGATGCTTATGATGCTTGAACTACTTAAAGGTCATGACGTTCATTCAGGTTCACGCTTACTAGAA
ACTAAGCTTGTTGTCCGTGGTAGCGCAGCGCCACCGCAACGCGCCTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

3D structure

• AlphaFold DB: A0A072GUT1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	100	100	1
cytR	Vibrio cholerae C6706	90.719	99.701	0.904