Detailed information NTG0764891

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: O1N17_RS15010
• Genome accession: NZ_CP114183
• Coordinates: 3128769..3129776 (+)
• Length: 335 a.a.
• NCBI ID: WP_005481416.1
• Uniprot ID: A0A072GUT1
• Organism: Vibrio parahaemolyticus strain PH1339
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3123769..3134776

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
O1N17_RS14990 (O1N17_14980)	rplC	3124303..3124932 (-)	630	WP_005456132.1	50S ribosomal protein L3	-
O1N17_RS14995 (O1N17_14985)	rpsJ	3124947..3125258 (-)	312	WP_004410492.1	30S ribosomal protein S10	-
O1N17_RS15000 (O1N17_14990)	rpmE	3125716..3125937 (-)	222	WP_005457203.1	50S ribosomal protein L31	-
O1N17_RS15005 (O1N17_14995)	priA	3126232..3128436 (+)	2205	WP_108744570.1	primosomal protein N'	-
O1N17_RS15010 (O1N17_15000)	cytR	3128769..3129776 (+)	1008	WP_005481416.1	DNA-binding transcriptional regulator CytR	Regulator
O1N17_RS15015 (O1N17_15005)	ftsN	3129953..3130498 (+)	546	WP_005481405.1	cell division protein FtsN	-
O1N17_RS15020 (O1N17_15010)	hslV	3130663..3131214 (+)	552	WP_108744571.1	ATP-dependent protease subunit HslV	-
O1N17_RS15025 (O1N17_15015)	hslU	3131238..3132569 (+)	1332	WP_108744572.1	HslU--HslV peptidase ATPase subunit	-
O1N17_RS15030 (O1N17_15020)	-	3132994..3133218 (-)	225	WP_029864913.1	hypothetical protein	-
O1N17_RS15035 (O1N17_15025)	-	3133378..3133527 (-)	150	WP_108744573.1	AlpA family phage regulatory protein	-
O1N17_RS15040 (O1N17_15030)	radC	3133698..3134171 (+)	474	WP_053317965.1	DNA repair protein RadC	-
O1N17_RS15045 (O1N17_15035)	-	3134168..3134599 (+)	432	WP_029864910.1	DUF2787 family protein	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36835.35 Da
• Isoelectric Point: 6.4938

>NTDB_id=764891 O1N17_RS15010 WP_005481416.1 3128769..3129776(+) (cytR) [Vibrio parahaemolyticus strain PH1339]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEDAVLEAGYSPNSLARNLRRNESKTIVTIVPDICDPYFSEIIRG
IEDAAMEHGYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPDTAVLCQFRQQGYQQALRRAGISKDPQYSVITEFSFDGGAKAVRKLLELPEPPTA
IFCHCDTMAIGAIQEAKRLGLRVPQDLSVVGFDDINFAQYCDPPLTTISQPRYEIGRQAMLMMLELLKGHDVHSGSRLLE
TKLVVRGSAAPPQRA

Nucleotide

• Length: 1008 bp

>NTDB_id=764891 O1N17_RS15010 WP_005481416.1 3128769..3129776(+) (cytR) [Vibrio parahaemolyticus strain PH1339]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCGGGAGTGTCGACAGCTACGGTATCTCGAGCATTAATGAATCCAGAAAA
AGTCTCTTCTTCAACAAGAAAAAGAGTCGAAGATGCCGTCCTTGAAGCGGGCTATTCTCCAAATTCATTAGCGCGTAATC
TACGTAGAAACGAATCAAAAACGATTGTTACCATCGTTCCTGACATCTGTGATCCTTACTTTTCTGAAATCATTCGTGGT
ATCGAAGACGCCGCAATGGAACATGGCTACCTCGTACTGCTCGGTGACAGCGGCCAGCAGAAAAAGCGTGAAAGCTCGTT
TGTGAATCTAGTGTTCACCAAACAAGCCGATGGCATGTTACTGCTTGGCACCGACCTGCCATTTGATGTCAGCAAGCCAG
AACAGAAAAACCTGCCACCAATGGTCATGGCTTGTGAGTTTGCGCCAGAGCTAGAATTACCAACCGTACACATTGACAAC
CTAACGTCTGCTTTTGAAGCGGTCAATTACCTAACTCAGCTTGGCCATAAACGCATAGCACAAATTTCAGGGCCAGACAC
AGCGGTGTTGTGTCAGTTCCGCCAGCAAGGTTATCAACAAGCCTTGCGTCGCGCGGGGATCAGTAAAGACCCACAATACA
GCGTTATCACTGAGTTTTCTTTTGACGGCGGCGCGAAAGCTGTACGTAAGTTGCTAGAACTTCCAGAGCCACCAACTGCG
ATTTTCTGCCACTGTGACACCATGGCAATCGGCGCAATCCAAGAAGCGAAACGACTCGGTCTGCGTGTTCCACAAGATCT
GTCGGTGGTTGGTTTCGATGATATCAACTTTGCTCAATACTGCGATCCACCGTTAACGACCATTTCTCAACCTCGTTATG
AAATTGGCCGCCAAGCGATGCTTATGATGCTCGAACTACTTAAAGGCCATGACGTTCATTCAGGTTCACGCTTACTAGAA
ACTAAGCTTGTTGTCCGTGGTAGCGCAGCGCCACCGCAACGCGCCTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

3D structure

• AlphaFold DB: A0A072GUT1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	100	100	1
cytR	Vibrio cholerae C6706	90.719	99.701	0.904