Detailed information    

insolico Bioinformatically predicted

Overview

Name   degQ   Type   Regulator
Locus tag   M1L51_RS14945 Genome accession   NZ_CP114180
Coordinates   3059017..3059157 (-) Length   46 a.a.
NCBI ID   WP_003152043.1    Uniprot ID   A3KLB4
Organism   Bacillus velezensis strain DMW1     
Function   modification of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3054017..3064157
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M1L51_RS14920 - 3054314..3054697 (-) 384 WP_053574130.1 hotdog fold thioesterase -
  M1L51_RS14925 comA 3054719..3055363 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  M1L51_RS14930 comP 3055444..3057747 (-) 2304 WP_040238945.1 sensor histidine kinase Regulator
  M1L51_RS14940 comQ 3057900..3058886 (-) 987 WP_269195024.1 class 1 isoprenoid biosynthesis enzyme Regulator
  M1L51_RS14945 degQ 3059017..3059157 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  M1L51_RS14950 - 3059620..3059961 (+) 342 WP_007408677.1 hypothetical protein -
  M1L51_RS14955 - 3059968..3061191 (-) 1224 WP_007408678.1 EAL and HDOD domain-containing protein -
  M1L51_RS14960 - 3061321..3062787 (-) 1467 WP_015418109.1 nicotinate phosphoribosyltransferase -
  M1L51_RS14965 - 3062805..3063356 (-) 552 WP_003152033.1 cysteine hydrolase family protein -
  M1L51_RS14970 - 3063453..3063851 (-) 399 WP_003152031.1 YueI family protein -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5518.30 Da        Isoelectric Point: 4.9432

>NTDB_id=764809 M1L51_RS14945 WP_003152043.1 3059017..3059157(-) (degQ) [Bacillus velezensis strain DMW1]
MENKLEEVKQLLFRLENDIRETTDSLRNINKSIDQLDKFSYAMKIS

Nucleotide


Download         Length: 141 bp        

>NTDB_id=764809 M1L51_RS14945 WP_003152043.1 3059017..3059157(-) (degQ) [Bacillus velezensis strain DMW1]
GTGGAAAACAAATTAGAAGAAGTAAAGCAATTATTATTCCGACTTGAAAATGATATCAGAGAAACAACCGACTCATTACG
AAACATTAACAAAAGCATTGATCAGCTCGATAAATTCTCATATGCAATGAAAATTTCTTAA

Domains

Predicted by InterproScan.

DegQ (SacQ) family (DegQ)

(1-46)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A3KLB4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degQ Bacillus subtilis subsp. subtilis str. 168

89.13

100

0.891