Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   LPC25_RS02190 Genome accession   NZ_AP025176
Coordinates   485861..486664 (+) Length   267 a.a.
NCBI ID   WP_001134193.1    Uniprot ID   -
Organism   Staphylococcus aureus strain TPS5614     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 480861..491664
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LPC25_RS02170 (TPS5614TP_04130) - 482407..483744 (+) 1338 WP_000812832.1 aminotransferase class V-fold PLP-dependent enzyme -
  LPC25_RS02175 (TPS5614TP_04140) tmk 483746..484363 (+) 618 WP_001272126.1 dTMP kinase -
  LPC25_RS02180 (TPS5614TP_04150) - 484391..484720 (+) 330 WP_000781979.1 cyclic-di-AMP receptor -
  LPC25_RS02185 (TPS5614TP_04160) - 484934..485860 (+) 927 WP_000344337.1 DNA polymerase III subunit delta' C-terminal domain-containing protein -
  LPC25_RS02190 (TPS5614TP_04170) yaaT 485861..486664 (+) 804 WP_001134193.1 PSP1 domain-containing protein Regulator
  LPC25_RS02195 (TPS5614TP_04180) yabA 486681..487028 (+) 348 WP_000375686.1 DNA replication initiation control protein YabA -
  LPC25_RS02200 (TPS5614TP_04190) - 487302..488027 (+) 726 WP_000910684.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  LPC25_RS02205 (TPS5614TP_04200) - 488020..488268 (+) 249 WP_000377064.1 GIY-YIG nuclease family protein -
  LPC25_RS02210 (TPS5614TP_04210) rsmI 488270..489109 (+) 840 WP_000279926.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  LPC25_RS02215 (TPS5614TP_04220) metG 489394..491367 (+) 1974 WP_001051129.1 methionine--tRNA ligase -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 30204.83 Da        Isoelectric Point: 4.5759

>NTDB_id=76478 LPC25_RS02190 WP_001134193.1 485861..486664(+) (yaaT) [Staphylococcus aureus strain TPS5614]
MPNVIGVQFQKAGKLEYYTPNDIQVDIDDWVVVESKRGIEIGIVKNPLMDIAEEDVVLPLKNIIRVADDKDIDKFNCNER
DAENALILCKDIVREQGLDMRLVNCEYTLDKSKVIFNFTADDRIDFRKLVKILAQHLKTRIELRQIGVRDEAKLLGGIGP
CGRSLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGACGRLMCCLKYENDYYEEVRAQLPDIGEAIETPDGNGKVVALNI
LDISMQVKLEGHEQPLEYKLEEIETMH

Nucleotide


Download         Length: 804 bp        

>NTDB_id=76478 LPC25_RS02190 WP_001134193.1 485861..486664(+) (yaaT) [Staphylococcus aureus strain TPS5614]
ATGCCAAATGTAATAGGTGTTCAGTTTCAAAAAGCGGGAAAATTAGAATATTATACACCTAATGATATACAAGTAGATAT
AGATGACTGGGTAGTTGTCGAATCTAAAAGAGGCATAGAGATAGGTATTGTTAAAAATCCATTAATGGATATTGCTGAAG
AGGATGTTGTGTTACCTCTTAAAAATATTATTCGCGTTGCTGATGACAAAGATATTGATAAATTTAATTGTAATGAACGA
GATGCTGAAAATGCATTAATACTATGTAAAGACATTGTAAGAGAACAAGGTTTGGACATGCGTTTAGTCAATTGCGAATA
TACATTAGATAAATCGAAAGTTATTTTTAATTTTACGGCGGATGATCGTATTGATTTTAGAAAATTAGTAAAAATATTAG
CGCAACATTTAAAAACACGTATCGAGTTGAGACAAATTGGTGTAAGGGATGAAGCCAAATTGCTTGGCGGTATCGGACCT
TGTGGTAGGTCGTTATGTTGTTCTACATTTTTAGGGGATTTTGAACCAGTATCGATTAAGATGGCTAAGGATCAAAATTT
ATCATTAAATCCAACTAAAATTTCTGGTGCATGTGGTCGTTTGATGTGTTGTTTAAAATATGAAAATGACTATTATGAGG
AAGTACGTGCACAATTACCTGATATTGGTGAAGCAATTGAAACGCCTGATGGTAACGGGAAAGTAGTTGCTTTAAATATA
TTAGACATTTCTATGCAGGTGAAGCTTGAGGGACATGAACAGCCACTTGAATATAAATTAGAAGAAATAGAAACTATGCA
TTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(61-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

63.118

98.502

0.622

Multiple sequence alignment