Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   M1L51_RS04205 Genome accession   NZ_CP114180
Coordinates   858759..859550 (+) Length   263 a.a.
NCBI ID   WP_053573608.1    Uniprot ID   -
Organism   Bacillus velezensis strain DMW1     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 853759..864550
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M1L51_RS04180 - 855753..856637 (+) 885 WP_053573606.1 PhzF family phenazine biosynthesis isomerase -
  M1L51_RS04185 - 856714..857298 (+) 585 WP_053573607.1 nitroreductase family protein -
  M1L51_RS04190 - 857338..857529 (-) 192 WP_003155508.1 YfhD family protein -
  M1L51_RS04195 - 857600..857710 (-) 111 WP_003155504.1 YfhE family protein -
  M1L51_RS04200 - 857768..858667 (-) 900 WP_039252291.1 TIGR01777 family oxidoreductase -
  M1L51_RS04205 recX 858759..859550 (+) 792 WP_053573608.1 recombination regulator RecX Regulator
  M1L51_RS04210 - 859557..859871 (+) 315 WP_007408553.1 YfhH family protein -
  M1L51_RS04215 - 860016..861209 (+) 1194 WP_076983409.1 MFS transporter -
  M1L51_RS04220 - 861249..861638 (-) 390 WP_053573609.1 DUF2606 family protein -
  M1L51_RS04225 - 861601..862512 (-) 912 WP_053573610.1 trypsin-like serine peptidase -
  M1L51_RS04230 - 862660..862812 (-) 153 WP_003155495.1 small, acid-soluble spore protein K -
  M1L51_RS04235 - 862936..863205 (+) 270 WP_003155492.1 YfhJ family protein -
  M1L51_RS04240 - 863333..863860 (+) 528 WP_015417063.1 SH3 domain-containing protein -
  M1L51_RS04245 - 863946..864281 (+) 336 WP_007408558.1 SdpI family protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30976.20 Da        Isoelectric Point: 6.0921

>NTDB_id=764760 M1L51_RS04205 WP_053573608.1 858759..859550(+) (recX) [Bacillus velezensis strain DMW1]
MPFITKISTQKKNTERFNIFLDEKYAFSVDADVLVRFDLKKGKELDELDILEIQYGDDVKKAFNRAVEFLSYRMRSEKEV
RDHLKKKETPDMVISEVIHKLYDYRYLNDKEFAEAYASTHKKTNGKGPDVLFRELKAKGIDDDTIKETLSAFTFDEQIQE
ALKHIGKILKKDKKLSTKEIKQRAQMQLQRKGFPFDVINAALEQTEYENDDEAEMEALKAHAEKAIRKYRYDGSYESGMK
VKQYLFRKGFSIDDIDQFLQEEE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=764760 M1L51_RS04205 WP_053573608.1 858759..859550(+) (recX) [Bacillus velezensis strain DMW1]
ATGCCGTTTATTACAAAAATATCGACCCAAAAGAAAAATACCGAGCGCTTCAACATCTTTCTTGATGAGAAATATGCATT
CAGCGTCGACGCCGACGTGCTTGTGCGTTTTGACCTGAAAAAAGGGAAAGAACTGGACGAGCTTGACATTCTTGAAATCC
AGTACGGCGATGACGTGAAAAAAGCCTTTAACCGCGCCGTAGAATTTTTATCATACCGGATGCGCTCTGAAAAAGAAGTC
CGGGATCATCTGAAGAAAAAAGAAACACCGGACATGGTCATTTCTGAAGTCATCCATAAACTGTACGATTACCGCTACTT
AAATGACAAAGAATTTGCCGAAGCCTATGCGAGCACCCACAAAAAAACAAACGGCAAAGGCCCTGACGTCCTGTTCCGCG
AGCTGAAAGCGAAAGGAATAGACGACGATACCATCAAGGAGACGCTCAGTGCGTTTACATTTGATGAGCAAATACAAGAA
GCGCTGAAACATATCGGCAAAATCCTGAAAAAGGACAAAAAGCTGTCCACAAAAGAGATCAAACAGCGGGCGCAGATGCA
GCTTCAGCGAAAAGGTTTCCCTTTCGACGTCATCAATGCCGCTCTGGAGCAGACGGAGTATGAAAATGATGATGAAGCCG
AGATGGAGGCTCTGAAGGCTCATGCGGAAAAAGCGATCAGGAAATACCGCTATGACGGCAGTTATGAAAGCGGAATGAAG
GTTAAACAGTACTTATTCAGAAAAGGATTCTCGATTGACGATATTGATCAATTCTTGCAGGAAGAGGAGTAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-206)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

79.848

100

0.798