Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   O0R49_RS07240 Genome accession   NZ_CP114177
Coordinates   1394981..1395553 (+) Length   190 a.a.
NCBI ID   WP_024426871.1    Uniprot ID   -
Organism   Bacillus safensis strain PLA 1006     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1389981..1400553
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  O0R49_RS07210 (O0R49_07210) dapD 1390095..1390805 (+) 711 WP_095408367.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  O0R49_RS07215 (O0R49_07215) - 1390840..1392018 (+) 1179 WP_269196292.1 N-acetyldiaminopimelate deacetylase -
  O0R49_RS07220 (O0R49_07220) - 1392069..1392311 (+) 243 WP_024424725.1 YkuS family protein -
  O0R49_RS07225 (O0R49_07225) - 1392334..1393143 (-) 810 WP_269196293.1 mechanosensitive ion channel family protein -
  O0R49_RS07230 (O0R49_07230) ahpA 1393416..1393958 (+) 543 WP_003211758.1 biofilm-specific peroxidase AhpA -
  O0R49_RS07235 (O0R49_07235) - 1394041..1394499 (+) 459 WP_269196294.1 TlpA disulfide reductase family protein -
  O0R49_RS07240 (O0R49_07240) rok 1394981..1395553 (+) 573 WP_024426871.1 transcriptional regulator Rok Regulator
  O0R49_RS07245 (O0R49_07245) - 1395600..1396517 (-) 918 WP_269196295.1 sigmaE regulated sporulation protein -
  O0R49_RS07250 (O0R49_07250) - 1396603..1397184 (+) 582 WP_269196296.1 molybdenum cofactor guanylyltransferase -
  O0R49_RS07255 (O0R49_07255) - 1397215..1398231 (+) 1017 WP_269196297.1 thiazole biosynthesis adenylyltransferase ThiF -
  O0R49_RS07260 (O0R49_07260) glp 1398241..1399518 (+) 1278 WP_269196298.1 gephyrin-like molybdotransferase Glp -
  O0R49_RS07265 (O0R49_07265) mobB 1399500..1400024 (+) 525 WP_095408683.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  O0R49_RS07270 (O0R49_07270) - 1400021..1400512 (+) 492 WP_058837772.1 molybdenum cofactor biosynthesis protein MoaE -

Sequence

Protein


Download         Length: 190 a.a.        Molecular weight: 21543.50 Da        Isoelectric Point: 9.7309

>NTDB_id=764705 O0R49_RS07240 WP_024426871.1 1394981..1395553(+) (rok) [Bacillus safensis strain PLA 1006]
MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVSDTKKEVRTERKTDSLPVLAELAAQEMRSYQQ
PAQPQSSSLGTGQLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTF
MQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 573 bp        

>NTDB_id=764705 O0R49_RS07240 WP_024426871.1 1394981..1395553(+) (rok) [Bacillus safensis strain PLA 1006]
TTGTTTAATGAGAGGGAAGCGTTACGTTTACGATTGGAACAATTAAATGAGGCAGAAGTAAAGGTCATCCGTGAATATCA
AATTGAGCGAGATGCGATTTATGCAAAATTAAGAGAATTAGACCGTCAAGGAACAGGTCTAGTGTCAGATACAAAAAAAG
AAGTGCGTACAGAGAGAAAGACGGATTCACTCCCTGTATTAGCTGAGCTTGCTGCGCAAGAAATGAGAAGCTACCAGCAG
CCGGCACAACCACAATCATCTTCTTTAGGAACAGGACAGCTAAACGGTGCACCTGTAGGTATTCCTGAAGGATCGACAAG
ACGCAGAAGAGGCACAGCCCGCCCTGGTTCAAAGGCAGCGAAGCTTCGTGAAGCTGCGATTAAAACGTTAAAGCGTCATA
ATGCAGCGATTAAAAGCTCAGAGCTTCAAAAAGAGATCGAAAAAGAGAGCGGTCTTGAAATCCCAAATATGACAACGTTT
ATGCAAAGTTTAATTAAAATGTACCCTGAAGTGAAGAAGCCTTATCGCGGACAGTATATTTTAGAAGGCGACATTCAAAC
AGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

81.283

98.421

0.8