Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   O0R49_RS07120 Genome accession   NZ_CP114177
Coordinates   1376359..1376820 (-) Length   153 a.a.
NCBI ID   WP_008356877.1    Uniprot ID   -
Organism   Bacillus safensis strain PLA 1006     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1371359..1381820
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  O0R49_RS07095 (O0R49_07095) - 1371961..1372845 (+) 885 WP_263640179.1 cation diffusion facilitator family transporter -
  O0R49_RS07100 (O0R49_07100) - 1372910..1373062 (-) 153 WP_162842519.1 hypothetical protein -
  O0R49_RS07105 (O0R49_07105) - 1373364..1373903 (+) 540 WP_249857145.1 RDD family protein -
  O0R49_RS07110 (O0R49_07110) - 1374029..1375339 (+) 1311 WP_249857146.1 MFS transporter -
  O0R49_RS07115 (O0R49_07115) - 1375413..1376321 (+) 909 WP_095408359.1 chemotaxis protein -
  O0R49_RS07120 (O0R49_07120) kre 1376359..1376820 (-) 462 WP_008356877.1 YkyB family protein Regulator
  O0R49_RS07125 (O0R49_07125) - 1377396..1377569 (+) 174 WP_186318630.1 hypothetical protein -
  O0R49_RS07130 (O0R49_07130) - 1377905..1378060 (+) 156 Protein_1353 EamA family transporter -
  O0R49_RS07135 (O0R49_07135) - 1378196..1378411 (-) 216 WP_075622942.1 hypothetical protein -
  O0R49_RS07140 (O0R49_07140) - 1378658..1379935 (-) 1278 WP_048238778.1 MFS transporter -
  O0R49_RS07145 (O0R49_07145) - 1380009..1380506 (-) 498 WP_095408361.1 L,D-transpeptidase family protein -
  O0R49_RS07150 (O0R49_07150) - 1380663..1381520 (-) 858 WP_269196289.1 metallophosphoesterase -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17711.30 Da        Isoelectric Point: 10.2452

>NTDB_id=764704 O0R49_RS07120 WP_008356877.1 1376359..1376820(-) (kre) [Bacillus safensis strain PLA 1006]
MDDYAHTKDIEPTAENIAKAIYTVNRHAKTAPNPKFLYLLKKRALQKLLQEGKGRKVGLHFSNNPKYSQQQSDVLIEIGD
YYFHLPPTKEDFEFLPHLGNLNQSYRNPKANMSLNRAKQILQTYVGLKEKPAATKQKSHYTKPVFKRLGESYF

Nucleotide


Download         Length: 462 bp        

>NTDB_id=764704 O0R49_RS07120 WP_008356877.1 1376359..1376820(-) (kre) [Bacillus safensis strain PLA 1006]
ATGGACGATTATGCTCATACTAAAGACATAGAACCTACAGCAGAAAACATCGCAAAAGCCATTTATACTGTTAACCGCCA
TGCTAAAACCGCACCAAACCCCAAGTTTCTTTATCTTTTGAAAAAACGAGCGCTGCAAAAACTATTACAAGAAGGTAAAG
GAAGAAAAGTGGGTCTACATTTCTCTAACAATCCCAAGTATAGTCAACAACAGTCCGACGTGCTGATTGAAATTGGAGAT
TATTATTTTCACCTGCCACCAACTAAAGAAGACTTCGAATTTTTGCCACACTTAGGAAATTTAAATCAATCATATCGCAA
TCCGAAAGCGAATATGTCATTAAACCGAGCAAAGCAAATACTTCAAACGTATGTCGGTTTAAAAGAAAAACCTGCCGCCA
CAAAACAAAAATCACATTACACAAAGCCCGTCTTCAAACGACTCGGGGAAAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

75.974

100

0.765