Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | O0R49_RS06925 | Genome accession | NZ_CP114177 |
| Coordinates | 1336931..1339033 (-) | Length | 700 a.a. |
| NCBI ID | WP_269196280.1 | Uniprot ID | - |
| Organism | Bacillus safensis strain PLA 1006 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1331931..1344033
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| O0R49_RS06900 (O0R49_06900) | - | 1332317..1332559 (+) | 243 | WP_034322108.1 | aspartyl-phosphate phosphatase Spo0E family protein | - |
| O0R49_RS06905 (O0R49_06905) | - | 1332606..1334111 (-) | 1506 | WP_269196278.1 | ATP-binding protein | - |
| O0R49_RS06910 (O0R49_06910) | - | 1334316..1334771 (+) | 456 | WP_034281539.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| O0R49_RS06915 (O0R49_06915) | motB | 1335000..1335767 (-) | 768 | WP_269196279.1 | flagellar motor protein MotB | - |
| O0R49_RS06920 (O0R49_06920) | motA | 1335760..1336554 (-) | 795 | WP_024424680.1 | flagellar motor stator protein MotA | - |
| O0R49_RS06925 (O0R49_06925) | clpC | 1336931..1339033 (-) | 2103 | WP_269196280.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| O0R49_RS06930 (O0R49_06930) | - | 1339278..1340321 (+) | 1044 | WP_095408337.1 | hypothetical protein | - |
| O0R49_RS06935 (O0R49_06935) | queC | 1340598..1341254 (+) | 657 | WP_024424683.1 | 7-cyano-7-deazaguanine synthase QueC | - |
| O0R49_RS06940 (O0R49_06940) | queD | 1341255..1341695 (+) | 441 | WP_095408338.1 | 6-carboxytetrahydropterin synthase QueD | - |
| O0R49_RS06945 (O0R49_06945) | queE | 1341688..1342419 (+) | 732 | WP_203129726.1 | 7-carboxy-7-deazaguanine synthase QueE | - |
| O0R49_RS06950 (O0R49_06950) | queF | 1342435..1342932 (+) | 498 | WP_269196281.1 | preQ(1) synthase | - |
| O0R49_RS06955 (O0R49_06955) | - | 1343191..1343409 (+) | 219 | WP_120207154.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 700 a.a. Molecular weight: 77875.41 Da Isoelectric Point: 5.1185
>NTDB_id=764703 O0R49_RS06925 WP_269196280.1 1336931..1339033(-) (clpC) [Bacillus safensis strain PLA 1006]
MRCQHCQVNEATIRLNMQVNSSRSQMVLCEDCYTSLMEQSKMKMGPQLFGGSSFFSQPAGHAPNGEQPKQKGLLDELGRN
LTDGANAGLIDPVIGRDEEVARVIEILNRRNKNNPVLIGEPGVGKTAIAEGLALKIASGDVPNKLKNKQIYLLDVSSLVA
NTGVRGQFEERMKQLIKELQSRKNIILFVDEIHLLVGAGSAEGSMDAGNILKPALARGELQLVGATTLKEYRQIEKDAAL
ERRFQPVIVDEPTQDEAIDILKGIQDKYEAYHGVTYSDEAIKACVHLSSRYIQDRHLPDKAIDLMDEAGSKANLSIDAAS
EDELTNRLAQIAAEKQAALKEEQYEKAAKLRDEEEAIEARLQNKTTDKEHIVTAEDIQTIVEQKTGIPVGKLQADEQTKM
KEIDVRLKARVIGQEHAVDKVAKAVKRSRAGLKSKHRPTGSFLFVGPTGVGKTELSKTLAEELFGSRDAIIRLDMSEYME
KHSVSKLIGSPPGYVGHDEAGQLTEKVRRKPYSIILLDEIEKAHPDVQHIFLQIMEDGRLTDSQGRTVSFKDTVIIMTSN
AGSADKTVKVGFQSDQEEAIEEQSLIDSLSSYFKPEFLNRFDSIIQFDSLDRNDLVKIVDLLLNELSEQLKEQNLTVHVT
NEAKEKIAELGYHPAFGARPLRRTIQEHVEDQMTEILLEEEQLTGFTVDVEHDEIVVKKG
MRCQHCQVNEATIRLNMQVNSSRSQMVLCEDCYTSLMEQSKMKMGPQLFGGSSFFSQPAGHAPNGEQPKQKGLLDELGRN
LTDGANAGLIDPVIGRDEEVARVIEILNRRNKNNPVLIGEPGVGKTAIAEGLALKIASGDVPNKLKNKQIYLLDVSSLVA
NTGVRGQFEERMKQLIKELQSRKNIILFVDEIHLLVGAGSAEGSMDAGNILKPALARGELQLVGATTLKEYRQIEKDAAL
ERRFQPVIVDEPTQDEAIDILKGIQDKYEAYHGVTYSDEAIKACVHLSSRYIQDRHLPDKAIDLMDEAGSKANLSIDAAS
EDELTNRLAQIAAEKQAALKEEQYEKAAKLRDEEEAIEARLQNKTTDKEHIVTAEDIQTIVEQKTGIPVGKLQADEQTKM
KEIDVRLKARVIGQEHAVDKVAKAVKRSRAGLKSKHRPTGSFLFVGPTGVGKTELSKTLAEELFGSRDAIIRLDMSEYME
KHSVSKLIGSPPGYVGHDEAGQLTEKVRRKPYSIILLDEIEKAHPDVQHIFLQIMEDGRLTDSQGRTVSFKDTVIIMTSN
AGSADKTVKVGFQSDQEEAIEEQSLIDSLSSYFKPEFLNRFDSIIQFDSLDRNDLVKIVDLLLNELSEQLKEQNLTVHVT
NEAKEKIAELGYHPAFGARPLRRTIQEHVEDQMTEILLEEEQLTGFTVDVEHDEIVVKKG
Nucleotide
Download Length: 2103 bp
>NTDB_id=764703 O0R49_RS06925 WP_269196280.1 1336931..1339033(-) (clpC) [Bacillus safensis strain PLA 1006]
ATGCGTTGTCAACATTGTCAAGTAAATGAAGCAACTATTCGCCTGAATATGCAAGTGAATTCGTCCCGGAGCCAAATGGT
TTTATGTGAAGACTGCTACACCTCTTTGATGGAGCAGTCAAAAATGAAAATGGGACCTCAGCTGTTTGGAGGAAGTTCAT
TTTTCTCTCAGCCAGCAGGACATGCCCCAAACGGGGAGCAGCCAAAACAAAAAGGCTTACTTGATGAGCTTGGCCGTAAC
TTAACAGATGGAGCAAATGCTGGTTTAATTGATCCAGTCATTGGCCGTGATGAAGAAGTCGCAAGAGTCATTGAGATTTT
AAATAGAAGAAATAAAAATAATCCTGTTCTTATTGGTGAACCAGGTGTTGGGAAAACAGCGATCGCAGAAGGACTCGCGC
TGAAAATTGCGAGCGGCGATGTGCCAAATAAATTAAAGAACAAACAAATCTATTTATTAGATGTCTCCTCACTTGTCGCA
AACACAGGTGTACGCGGTCAATTTGAGGAAAGAATGAAGCAGTTAATCAAAGAACTGCAAAGCCGTAAAAATATCATCTT
ATTTGTAGATGAAATCCACCTTCTTGTGGGCGCAGGCTCTGCAGAAGGATCAATGGATGCTGGAAACATTTTAAAACCAG
CCCTTGCAAGAGGCGAATTGCAGCTAGTAGGTGCGACGACATTAAAAGAATATCGCCAAATTGAAAAAGATGCTGCACTC
GAACGGCGCTTCCAGCCCGTCATCGTAGATGAGCCAACACAAGATGAAGCGATCGACATCTTAAAAGGCATTCAAGATAA
ATACGAGGCCTATCATGGTGTCACCTATTCAGATGAAGCAATCAAAGCGTGCGTTCATTTATCTTCGCGGTATATTCAAG
ACCGTCATTTACCGGATAAAGCCATTGATTTAATGGATGAAGCTGGTTCAAAAGCGAACCTCTCCATTGATGCAGCAAGT
GAAGATGAGCTGACAAACCGATTAGCGCAAATTGCCGCAGAAAAACAAGCTGCGCTAAAAGAAGAACAATATGAAAAAGC
AGCGAAGCTTCGCGATGAAGAAGAAGCCATTGAAGCAAGACTTCAAAACAAAACAACTGACAAAGAACATATCGTCACAG
CAGAGGACATTCAGACCATTGTGGAACAAAAAACAGGCATTCCTGTCGGTAAACTGCAAGCAGACGAACAAACCAAAATG
AAAGAAATTGACGTCCGTCTAAAAGCACGAGTGATTGGGCAGGAGCATGCGGTTGATAAAGTGGCCAAAGCCGTGAAAAG
AAGCAGAGCTGGATTAAAATCGAAACATAGACCAACAGGCTCCTTCCTTTTCGTTGGACCAACAGGTGTCGGGAAAACCG
AATTGTCTAAAACGTTAGCTGAAGAATTATTCGGTTCAAGAGATGCGATCATTCGTTTAGATATGAGTGAGTACATGGAA
AAACACTCTGTGTCCAAACTCATCGGTTCTCCTCCTGGTTACGTTGGACATGATGAAGCTGGCCAGCTGACTGAAAAAGT
GCGCAGAAAACCATACAGCATCATTTTGCTGGATGAAATCGAAAAAGCACACCCAGATGTACAGCACATCTTCCTTCAAA
TCATGGAAGATGGCCGCTTAACAGACAGCCAAGGCAGAACAGTCAGCTTTAAAGATACAGTCATCATTATGACAAGTAAC
GCAGGCAGCGCAGATAAAACGGTCAAGGTCGGCTTCCAGTCTGATCAAGAAGAAGCGATTGAGGAACAATCACTCATTGA
TTCACTCAGCAGCTACTTCAAACCAGAATTCTTGAACCGTTTTGACAGCATCATTCAGTTTGATTCATTAGACAGAAATG
ATTTAGTGAAGATTGTTGATCTTCTGCTCAATGAGCTGTCAGAGCAATTAAAAGAGCAGAATTTAACAGTCCATGTCACA
AATGAAGCGAAAGAAAAAATCGCAGAGCTTGGATATCACCCTGCATTTGGTGCTCGTCCACTTCGGAGAACCATCCAAGA
GCACGTTGAAGATCAAATGACGGAGATCTTGCTTGAAGAGGAGCAGCTTACTGGATTTACTGTGGATGTTGAACATGACG
AAATCGTCGTAAAAAAAGGATAA
ATGCGTTGTCAACATTGTCAAGTAAATGAAGCAACTATTCGCCTGAATATGCAAGTGAATTCGTCCCGGAGCCAAATGGT
TTTATGTGAAGACTGCTACACCTCTTTGATGGAGCAGTCAAAAATGAAAATGGGACCTCAGCTGTTTGGAGGAAGTTCAT
TTTTCTCTCAGCCAGCAGGACATGCCCCAAACGGGGAGCAGCCAAAACAAAAAGGCTTACTTGATGAGCTTGGCCGTAAC
TTAACAGATGGAGCAAATGCTGGTTTAATTGATCCAGTCATTGGCCGTGATGAAGAAGTCGCAAGAGTCATTGAGATTTT
AAATAGAAGAAATAAAAATAATCCTGTTCTTATTGGTGAACCAGGTGTTGGGAAAACAGCGATCGCAGAAGGACTCGCGC
TGAAAATTGCGAGCGGCGATGTGCCAAATAAATTAAAGAACAAACAAATCTATTTATTAGATGTCTCCTCACTTGTCGCA
AACACAGGTGTACGCGGTCAATTTGAGGAAAGAATGAAGCAGTTAATCAAAGAACTGCAAAGCCGTAAAAATATCATCTT
ATTTGTAGATGAAATCCACCTTCTTGTGGGCGCAGGCTCTGCAGAAGGATCAATGGATGCTGGAAACATTTTAAAACCAG
CCCTTGCAAGAGGCGAATTGCAGCTAGTAGGTGCGACGACATTAAAAGAATATCGCCAAATTGAAAAAGATGCTGCACTC
GAACGGCGCTTCCAGCCCGTCATCGTAGATGAGCCAACACAAGATGAAGCGATCGACATCTTAAAAGGCATTCAAGATAA
ATACGAGGCCTATCATGGTGTCACCTATTCAGATGAAGCAATCAAAGCGTGCGTTCATTTATCTTCGCGGTATATTCAAG
ACCGTCATTTACCGGATAAAGCCATTGATTTAATGGATGAAGCTGGTTCAAAAGCGAACCTCTCCATTGATGCAGCAAGT
GAAGATGAGCTGACAAACCGATTAGCGCAAATTGCCGCAGAAAAACAAGCTGCGCTAAAAGAAGAACAATATGAAAAAGC
AGCGAAGCTTCGCGATGAAGAAGAAGCCATTGAAGCAAGACTTCAAAACAAAACAACTGACAAAGAACATATCGTCACAG
CAGAGGACATTCAGACCATTGTGGAACAAAAAACAGGCATTCCTGTCGGTAAACTGCAAGCAGACGAACAAACCAAAATG
AAAGAAATTGACGTCCGTCTAAAAGCACGAGTGATTGGGCAGGAGCATGCGGTTGATAAAGTGGCCAAAGCCGTGAAAAG
AAGCAGAGCTGGATTAAAATCGAAACATAGACCAACAGGCTCCTTCCTTTTCGTTGGACCAACAGGTGTCGGGAAAACCG
AATTGTCTAAAACGTTAGCTGAAGAATTATTCGGTTCAAGAGATGCGATCATTCGTTTAGATATGAGTGAGTACATGGAA
AAACACTCTGTGTCCAAACTCATCGGTTCTCCTCCTGGTTACGTTGGACATGATGAAGCTGGCCAGCTGACTGAAAAAGT
GCGCAGAAAACCATACAGCATCATTTTGCTGGATGAAATCGAAAAAGCACACCCAGATGTACAGCACATCTTCCTTCAAA
TCATGGAAGATGGCCGCTTAACAGACAGCCAAGGCAGAACAGTCAGCTTTAAAGATACAGTCATCATTATGACAAGTAAC
GCAGGCAGCGCAGATAAAACGGTCAAGGTCGGCTTCCAGTCTGATCAAGAAGAAGCGATTGAGGAACAATCACTCATTGA
TTCACTCAGCAGCTACTTCAAACCAGAATTCTTGAACCGTTTTGACAGCATCATTCAGTTTGATTCATTAGACAGAAATG
ATTTAGTGAAGATTGTTGATCTTCTGCTCAATGAGCTGTCAGAGCAATTAAAAGAGCAGAATTTAACAGTCCATGTCACA
AATGAAGCGAAAGAAAAAATCGCAGAGCTTGGATATCACCCTGCATTTGGTGCTCGTCCACTTCGGAGAACCATCCAAGA
GCACGTTGAAGATCAAATGACGGAGATCTTGCTTGAAGAGGAGCAGCTTACTGGATTTACTGTGGATGTTGAACATGACG
AAATCGTCGTAAAAAAAGGATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Lactococcus lactis subsp. cremoris KW2 |
56.775 |
100 |
0.599 |
| clpE | Streptococcus mutans UA159 |
57.064 |
100 |
0.589 |
| clpE | Streptococcus pneumoniae Rx1 |
55.387 |
100 |
0.573 |
| clpE | Streptococcus pneumoniae D39 |
55.387 |
100 |
0.573 |
| clpE | Streptococcus pneumoniae R6 |
55.387 |
100 |
0.573 |
| clpE | Streptococcus pneumoniae TIGR4 |
55.387 |
100 |
0.573 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
54.03 |
95.714 |
0.517 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
47.077 |
92.857 |
0.437 |
| clpC | Streptococcus thermophilus LMD-9 |
45.82 |
92.286 |
0.423 |
| clpC | Streptococcus thermophilus LMG 18311 |
45.511 |
92.286 |
0.42 |
| clpC | Streptococcus pneumoniae TIGR4 |
44.795 |
90.571 |
0.406 |
| clpC | Streptococcus pneumoniae Rx1 |
44.992 |
89.857 |
0.404 |
| clpC | Streptococcus pneumoniae D39 |
44.992 |
89.857 |
0.404 |
| clpC | Streptococcus mutans UA159 |
44.444 |
90 |
0.4 |