Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   O0R49_RS04170 Genome accession   NZ_CP114177
Coordinates   837876..838667 (+) Length   263 a.a.
NCBI ID   WP_024425808.1    Uniprot ID   A0AAP7QSG5
Organism   Bacillus safensis strain PLA 1006     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 832876..843667
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  O0R49_RS04135 (O0R49_04135) - 832962..833510 (+) 549 WP_269196109.1 thioredoxin family protein -
  O0R49_RS04140 (O0R49_04140) - 833844..834311 (+) 468 WP_048240073.1 thiol-disulfide oxidoreductase DCC family protein -
  O0R49_RS04145 (O0R49_04145) - 834349..835605 (-) 1257 WP_024425225.1 transcriptional regulator -
  O0R49_RS04150 (O0R49_04150) - 835879..836466 (+) 588 WP_269196110.1 nitroreductase -
  O0R49_RS04155 (O0R49_04155) - 836505..836660 (-) 156 WP_024425223.1 YfhD family protein -
  O0R49_RS04160 (O0R49_04160) - 836722..836832 (-) 111 WP_017358836.1 YfhE family protein -
  O0R49_RS04165 (O0R49_04165) - 836885..837781 (-) 897 WP_048240069.1 TIGR01777 family oxidoreductase -
  O0R49_RS04170 (O0R49_04170) recX 837876..838667 (+) 792 WP_024425808.1 recombination regulator RecX Regulator
  O0R49_RS04175 (O0R49_04175) - 838671..838985 (+) 315 WP_047202061.1 YfhH family protein -
  O0R49_RS04180 (O0R49_04180) - 839083..839256 (-) 174 WP_008360604.1 YpzG family protein -
  O0R49_RS04185 (O0R49_04185) - 839282..839431 (-) 150 WP_003217849.1 small, acid-soluble spore protein K -
  O0R49_RS04190 (O0R49_04190) - 839548..839820 (+) 273 WP_024425219.1 YfhJ family protein -
  O0R49_RS04195 (O0R49_04195) - 840120..841103 (+) 984 WP_024425218.1 glycosyltransferase family 2 protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30635.09 Da        Isoelectric Point: 6.6682

>NTDB_id=764690 O0R49_RS04170 WP_024425808.1 837876..838667(+) (recX) [Bacillus safensis strain PLA 1006]
MPYITKISAQKNNTERVNIFLDEKYAFSVDLDVLVQHDLKKGKELDEADIIEIQFGDSVKKGFQQAVDYLSYRMRSVKEV
TDYLTKKEIPAPAISEIIHKLKHYKYVNDLEFAEAYVSTHRKTNSKGPSVLKKELKLKGIDDDTIEQALSQYPDDLQLEE
AVKQVLKLVKKEKNRSAKEIEQRIKLQLQRKGFSFEIIDKALQEAYDGQEEEKEEEALLYMLEKAKRKVGYDGSFEKKMK
VKQFLFRKGFDLDTIDHVLDKGE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=764690 O0R49_RS04170 WP_024425808.1 837876..838667(+) (recX) [Bacillus safensis strain PLA 1006]
ATGCCCTATATTACAAAAATTTCTGCTCAGAAAAACAATACAGAGCGGGTAAACATCTTTCTTGATGAAAAGTACGCCTT
TAGCGTTGATTTAGATGTGCTCGTCCAGCACGATTTGAAAAAAGGAAAAGAGCTGGACGAAGCAGATATCATTGAGATTC
AATTCGGTGATTCGGTGAAAAAAGGATTTCAGCAGGCCGTTGATTATTTATCCTACCGAATGAGATCAGTGAAAGAAGTC
ACCGATTATTTAACGAAAAAAGAAATCCCTGCACCTGCTATTAGTGAAATTATACACAAATTGAAGCATTATAAGTATGT
AAATGATCTTGAATTTGCAGAAGCCTATGTCAGCACCCACCGGAAAACGAACAGCAAAGGACCGTCCGTCCTAAAAAAAG
AATTGAAGCTCAAGGGGATAGACGATGACACGATTGAACAGGCGTTATCGCAATACCCTGATGACCTACAGCTCGAGGAA
GCCGTAAAGCAGGTTCTCAAGCTTGTCAAAAAAGAAAAAAATCGTTCTGCAAAAGAGATCGAGCAGCGCATCAAGCTGCA
GCTGCAGCGAAAGGGATTTTCGTTTGAGATCATTGATAAAGCCCTTCAAGAAGCCTATGATGGACAAGAAGAGGAAAAGG
AAGAAGAAGCCCTCCTTTATATGCTGGAGAAGGCAAAACGCAAGGTAGGGTATGACGGATCATTTGAAAAGAAGATGAAA
GTGAAGCAATTTTTATTCAGAAAAGGCTTTGATCTCGATACAATTGATCACGTTTTAGACAAAGGGGAATGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

63.878

100

0.639