Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   TthTMY_RS11105 Genome accession   NZ_AP025158
Coordinates   2058523..2059290 (-) Length   255 a.a.
NCBI ID   WP_223903285.1    Uniprot ID   -
Organism   Thermus thermophilus strain TMY     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 2053523..2064290
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  TthTMY_RS11075 (TthTMY_22020) - 2053823..2054275 (+) 453 WP_096411288.1 arsenate reductase ArsC -
  TthTMY_RS11080 (TthTMY_22030) ubiE 2054272..2054934 (-) 663 WP_229365160.1 bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE -
  TthTMY_RS11085 (TthTMY_22040) - 2055026..2056840 (+) 1815 WP_223903284.1 ABC transporter permease -
  TthTMY_RS11090 (TthTMY_22050) - 2056837..2057748 (+) 912 WP_096411290.1 ABC transporter permease -
  TthTMY_RS11095 (TthTMY_22060) - 2057736..2057993 (-) 258 WP_096411291.1 hypothetical protein -
  TthTMY_RS11100 (TthTMY_22070) - 2057990..2058526 (-) 537 WP_096411292.1 flavin reductase family protein -
  TthTMY_RS11105 (TthTMY_22080) yaaT 2058523..2059290 (-) 768 WP_223903285.1 PSP1 domain-containing protein Regulator
  TthTMY_RS11110 (TthTMY_22090) - 2059287..2060093 (-) 807 WP_096411293.1 DNA polymerase III subunit delta' -
  TthTMY_RS11115 (TthTMY_22100) - 2060060..2060782 (-) 723 WP_223903286.1 metallophosphoesterase family protein -
  TthTMY_RS11120 (TthTMY_22110) - 2060797..2061426 (+) 630 WP_223903287.1 hypothetical protein -
  TthTMY_RS11125 (TthTMY_22120) - 2061437..2061637 (+) 201 WP_096411294.1 hypothetical protein -
  TthTMY_RS11130 (TthTMY_22130) - 2061634..2062788 (-) 1155 WP_096411295.1 extracellular solute-binding protein -
  TthTMY_RS11135 (TthTMY_22140) - 2062794..2063546 (-) 753 Protein_2177 extracellular solute-binding protein -

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 28501.98 Da        Isoelectric Point: 8.9315

>NTDB_id=76465 TthTMY_RS11105 WP_223903285.1 2058523..2059290(-) (yaaT) [Thermus thermophilus strain TMY]
MTVGVRFRTPVLRYVRFRGEAPPVDAFVVVRTGRGLEVGRVRTPPVDRPASGEVVRLASKEDLDRAARLRARAEEALHFV
RARFREEGVQAKILGCDFTLDGRHLVIHYSAEERVNLRRFAPELARALGARIEFVAEGPREEARYLGTLGACGMESCCST
WLQGFAQVSIKLARDQQLPLNPEKISGPCGRLLCCLTYEHPVYQELLKELPKKNARVCTREGVCGKVQKVNPLKGTVELH
LEDGKTLEVSKEELA

Nucleotide


Download         Length: 768 bp        

>NTDB_id=76465 TthTMY_RS11105 WP_223903285.1 2058523..2059290(-) (yaaT) [Thermus thermophilus strain TMY]
ATGACCGTGGGCGTACGCTTCCGTACCCCCGTCCTCCGCTACGTCCGCTTCCGGGGGGAGGCCCCGCCCGTGGACGCCTT
CGTGGTGGTCCGCACCGGACGGGGGCTGGAGGTGGGCCGGGTCCGCACCCCTCCCGTGGACCGGCCGGCCTCGGGGGAGG
TGGTGCGGCTCGCCTCCAAGGAGGACCTGGACCGGGCGGCGAGGCTTCGCGCCCGGGCGGAGGAGGCCCTCCACTTCGTC
CGGGCCCGGTTCCGGGAGGAAGGGGTGCAGGCCAAGATCCTGGGGTGCGACTTCACCCTGGACGGCCGCCACCTCGTCAT
CCACTACAGCGCCGAGGAGCGGGTGAACCTGAGGCGCTTTGCCCCCGAGCTCGCCCGCGCCCTGGGGGCCCGGATTGAGT
TCGTGGCCGAAGGCCCCCGGGAGGAGGCCCGCTACCTGGGGACCTTGGGGGCCTGCGGCATGGAGTCCTGCTGCTCCACC
TGGCTCCAGGGCTTCGCCCAGGTCTCCATCAAGCTCGCCCGGGACCAGCAGCTTCCCCTAAACCCCGAGAAGATCTCGGG
CCCCTGCGGGAGGCTTCTCTGCTGCCTCACCTACGAGCACCCCGTCTACCAGGAGCTTCTCAAGGAGCTTCCCAAGAAGA
ACGCCCGGGTGTGCACGAGGGAGGGGGTCTGCGGCAAGGTGCAGAAGGTGAACCCCTTGAAGGGCACGGTGGAGCTCCAC
CTGGAGGACGGGAAGACCCTCGAGGTCTCCAAGGAGGAGCTCGCGTGA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(53-135)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

35.632

100

0.365

Multiple sequence alignment