Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   QM319_RS00125 Genome accession   NZ_CP125863
Coordinates   31451..32251 (+) Length   266 a.a.
NCBI ID   WP_001807805.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 19-00012     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 26451..37251
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QM319_RS00110 (QM319_00110) walK 27121..28947 (+) 1827 WP_000871607.1 cell wall metabolism sensor histidine kinase WalK -
  QM319_RS00115 (QM319_00115) yycH 28940..30274 (+) 1335 WP_001060144.1 two-component system activity regulator YycH -
  QM319_RS00120 (QM319_00120) yycI 30275..31063 (+) 789 WP_001104170.1 two-component system regulatory protein YycI -
  QM319_RS00125 (QM319_00125) vicX 31451..32251 (+) 801 WP_001807805.1 MBL fold metallo-hydrolase Regulator
  QM319_RS00130 (QM319_00130) adsA 32478..34799 (+) 2322 WP_000645765.1 LPXTG-anchored adenosine synthase AdsA -
  QM319_RS00135 (QM319_00135) rlmH 35165..35644 (+) 480 WP_000704775.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  QM319_RS00140 (QM319_00140) - 35966..37221 (+) 1256 Protein_25 DUF3578 domain-containing protein -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30313.56 Da        Isoelectric Point: 6.5000

>NTDB_id=764488 QM319_RS00125 WP_001807805.1 31451..32251(+) (vicX) [Staphylococcus aureus strain 19-00012]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIKDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=764488 QM319_RS00125 WP_001807805.1 31451..32251(+) (vicX) [Staphylococcus aureus strain 19-00012]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGCAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGTAATATTAAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGATCATATTAAAGGATTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATTCCTATGGATCAGAAATTTATTTTTAATCC
TTATGAAACGAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAACGTGTCACATGATGCGATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTAACGGATACGGGTTACGTGTCTGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGCGATATGGGTCATGTATCTAATGAGGATGCGGGTCATGCGATGACAGACGTGATTACAGGTAACACGA
AACGTATTTACTTATCGCATTTATCACAAGATAATAACATGAAAGATTTGGCGCGTATGAGTGTTGGCCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

49.027

96.617

0.474