Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   QM316_RS10460 Genome accession   NZ_CP125862
Coordinates   2095548..2096348 (-) Length   266 a.a.
NCBI ID   WP_000088649.1    Uniprot ID   A0A7U7JRT9
Organism   Staphylococcus aureus strain 18-02202-1     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2090548..2101348
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QM316_RS10445 (QM316_10425) - 2091604..2091909 (-) 306 WP_000677988.1 hypothetical protein -
  QM316_RS10450 (QM316_10430) rlmH 2092155..2092634 (-) 480 WP_000704775.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  QM316_RS10455 (QM316_10435) adsA 2093003..2095321 (-) 2319 WP_151366933.1 LPXTG-anchored adenosine synthase AdsA -
  QM316_RS10460 (QM316_10440) vicX 2095548..2096348 (-) 801 WP_000088649.1 MBL fold metallo-hydrolase Regulator
  QM316_RS10465 (QM316_10445) yycI 2096737..2097525 (-) 789 WP_001104167.1 two-component system regulatory protein YycI -
  QM316_RS10470 (QM316_10450) yycH 2097526..2098860 (-) 1335 WP_001060140.1 two-component system activity regulator YycH -
  QM316_RS10475 (QM316_10455) walK 2098853..2100679 (-) 1827 WP_000871607.1 cell wall metabolism sensor histidine kinase WalK -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30313.52 Da        Isoelectric Point: 6.3392

>NTDB_id=764470 QM316_RS10460 WP_000088649.1 2095548..2096348(-) (vicX) [Staphylococcus aureus strain 18-02202-1]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=764470 QM316_RS10460 WP_000088649.1 2095548..2096348(-) (vicX) [Staphylococcus aureus strain 18-02202-1]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGCAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGATCATATTAAAGGATTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACAAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAATGTGTCACATGATGCAATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTGACAGATACGGGTTACGTGTCTGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGCGATATGGGTCATGTATCTAATGAGGATGCGGGTCATGCGATGACAGACGTGATTACAGGTAACACGA
AACGTATTTACTTATCGCATTTATCACAAGATAATAACATGAAAGATTTGGCGCGTATGAGTGTTGGTCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7JRT9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

49.027

96.617

0.474