Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   QM316_RS07200 Genome accession   NZ_CP125862
Coordinates   1413937..1414611 (-) Length   224 a.a.
NCBI ID   WP_001166496.1    Uniprot ID   Q2YSS2
Organism   Staphylococcus aureus strain 18-02202-1     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1408937..1419611
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QM316_RS07185 (QM316_07175) vraG 1410120..1412009 (-) 1890 WP_000143606.1 ABC transporter permease VraG -
  QM316_RS07190 (QM316_07180) vraF 1411999..1412760 (-) 762 WP_000985996.1 ABC transporter ATP-binding protein VraF -
  QM316_RS07195 (QM316_07185) graS 1412904..1413944 (-) 1041 WP_221922302.1 histidine kinase GraS/ApsS -
  QM316_RS07200 (QM316_07190) braR 1413937..1414611 (-) 675 WP_001166496.1 response regulator transcription factor GraR/ApsR Regulator
  QM316_RS07205 (QM316_07195) graX 1414627..1415550 (-) 924 WP_000802957.1 auxiliary protein GraX/ApsX -
  QM316_RS07210 (QM316_07200) - 1415663..1416169 (+) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  QM316_RS07215 (QM316_07205) - 1416371..1416799 (-) 429 WP_000198501.1 hypothetical protein -
  QM316_RS07220 (QM316_07210) - 1417128..1418171 (-) 1044 WP_001030757.1 alpha/beta hydrolase -
  QM316_RS07225 (QM316_07215) - 1418322..1419389 (-) 1068 WP_000980142.1 membrane protein -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 26093.93 Da        Isoelectric Point: 4.3563

>NTDB_id=764462 QM316_RS07200 WP_001166496.1 1413937..1414611(-) (braR) [Staphylococcus aureus strain 18-02202-1]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAIIDLSKDSIQKGDDTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=764462 QM316_RS07200 WP_001166496.1 1413937..1414611(-) (braR) [Staphylococcus aureus strain 18-02202-1]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAGCCTTTTTATACAAATGTATT
AATTGCTAAATTACAAGCGATTTATCGACGAGTGTATGAATTTACTGCTGAAGAAAAACGCACGTTAACATGGCAAGATG
CCATTATAGATCTATCAAAAGATAGTATACAAAAAGGTGACGATACGATTTTTCTATCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACCAAAAAAAATCAAATCGTTTCGAGAGATACAATTATCACTGCATTATGGGATGATGAAGCATTTGT
TAGTGATAATACGTTAACAGTAAATGTGAATCGTTTACGAAAAAAATTATCTGAAATAAGTATGGATAGTGCAATCGAAA
CAAAAGTAGGAAAAGGATATATGGCTCATGAATAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(149-221)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q2YSS2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.455

98.214

0.397