Detailed information NTG0764422

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: O0R52_RS19535
• Genome accession: NZ_CP114066
• Coordinates: 3827042..3828187 (+)
• Length: 381 a.a.
• NCBI ID: WP_044159817.1
• Uniprot ID: -
• Organism: Bacillus halotolerans strain B13
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3822042..3833187

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
O0R52_RS19515 (O0R52_19515)	-	3822917..3824194 (+)	1278	WP_269107515.1	M16 family metallopeptidase	-
O0R52_RS19520 (O0R52_19520)	-	3824191..3824892 (+)	702	WP_151174591.1	bacteriocin biosynthesis protein AlbG	-
O0R52_RS19525 (O0R52_19525)	-	3824899..3825255 (-)	357	Protein_3799	YncE family protein	-
O0R52_RS22745	-	3825247..3825414 (-)	168	Protein_3800	YncE family protein	-
O0R52_RS19530 (O0R52_19530)	-	3825455..3826813 (-)	1359	WP_269107518.1	YncE family protein	-
O0R52_RS19535 (O0R52_19535)	rapF	3827042..3828187 (+)	1146	WP_044159817.1	tetratricopeptide repeat protein	Regulator
O0R52_RS19540 (O0R52_19540)	-	3828171..3828290 (+)	120	WP_024123223.1	PhrC/PhrF family phosphatase-inhibitory pheromone	-
O0R52_RS19545 (O0R52_19545)	speB	3828397..3829269 (-)	873	WP_044159819.1	agmatinase	-
O0R52_RS19550 (O0R52_19550)	speE	3829330..3830160 (-)	831	WP_059335162.1	spermidine synthase	-
O0R52_RS19555 (O0R52_19555)	-	3830361..3832436 (+)	2076	WP_044159823.1	transglycosylase domain-containing protein	-
O0R52_RS19560 (O0R52_19560)	-	3832469..3832891 (-)	423	WP_215510050.1	hypothetical protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45458.93 Da
• Isoelectric Point: 4.8458

>NTDB_id=764422 O0R52_RS19535 WP_044159817.1 3827042..3828187(+) (rapF) [Bacillus halotolerans strain B13]
MTSVISSSSVGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLENMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDRREYILAIQFFKKAESKLTFVTDKIDKAEFFFKMSEVYYYMKQTYVS
MDYARQAFEIYNEQTTYDIRMIQCQSLFGANFLDLKQYDKAIAHFQKAYTLAEAAQQPQLMGRTLYNIALCKQNQHSLES
AIEYVKKSIHVFEESKMVPSLPQAFFLITQIYFKLGKIDNACEYHKKGRDYSIAAGDTVYLTEFEFLESLYLSGPDEAAI
EKCFVFLESKMMYADIEDFALDVAKYYHQQENYKKASTYFLKVEEARQHIQGGVNLYEMEV

Nucleotide

• Length: 1146 bp

>NTDB_id=764422 O0R52_RS19535 WP_044159817.1 3827042..3828187(+) (rapF) [Bacillus halotolerans strain B13]
GTGACAAGTGTCATATCTTCTTCTTCCGTTGGAGAAAAGATTAATGAATGGTATATGTACATACGCCGATTCAGCATACC
GGATGCGGAATATTTACGAAGAGAAATCAAACAAGAGCTGGATCAAATGGAAGAAGACCAGGATCTTCATTTGTATTATT
CACTGATGGAATTCCGGCACAATCTGATGCTTGAGTATCTTGAACCGTTAGAAAACATGCGGATAGAGGAACAGCCGCGA
CTGTCCGATTTGCTGCTTGAAATCGATAAAAAACAGGCTCGTTTAACCGGACTGCTTGAATACTACTTTAATTTCTTCAG
AGGTATGTACGAACTGGATCGCCGGGAATATATATTAGCCATTCAATTTTTTAAAAAAGCAGAGAGCAAACTGACTTTTG
TGACAGATAAAATTGATAAAGCTGAGTTCTTTTTCAAAATGTCAGAAGTTTATTACTATATGAAGCAAACTTATGTGTCC
ATGGACTATGCACGTCAAGCCTTTGAAATATACAATGAACAAACTACATATGATATCAGAATGATTCAATGCCAATCCCT
GTTTGGAGCTAACTTTTTGGATCTGAAACAGTATGATAAAGCAATTGCCCATTTCCAAAAAGCTTATACACTTGCTGAGG
CGGCACAGCAGCCGCAGCTAATGGGAAGAACGCTTTATAATATTGCACTTTGCAAGCAAAACCAACACAGTCTTGAATCA
GCGATAGAGTATGTAAAAAAATCTATTCATGTATTTGAAGAATCGAAAATGGTTCCTTCACTGCCACAAGCTTTTTTCCT
AATTACACAAATTTATTTTAAATTAGGCAAGATTGATAACGCTTGTGAATATCATAAAAAAGGAAGAGATTATTCAATAG
CTGCCGGAGACACTGTGTACTTAACGGAGTTTGAATTTTTGGAATCTTTATACTTGTCTGGACCTGATGAAGCAGCAATA
GAAAAATGTTTTGTTTTCCTTGAAAGTAAAATGATGTATGCTGATATTGAAGACTTTGCACTCGATGTTGCTAAGTATTA
TCATCAGCAGGAAAATTACAAAAAAGCATCTACTTATTTTTTAAAGGTTGAAGAAGCAAGACAGCACATTCAAGGGGGGG
TGAATTTATATGAAATGGAAGTATAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_8) (193-213)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	79.265	100	0.793
rapC	Bacillus subtilis subsp. subtilis str. 168	56.842	99.738	0.567