Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   QM316_RS00925 Genome accession   NZ_CP125862
Coordinates   152908..153648 (+) Length   246 a.a.
NCBI ID   WP_000216874.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 18-02202-1     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 147908..158648
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QM316_RS00900 (QM316_00895) yhaM 148326..149267 (+) 942 WP_001244175.1 3'-5' exoribonuclease YhaM -
  QM316_RS00905 (QM316_00900) - 149388..150350 (-) 963 WP_000782118.1 foldase protein PrsA -
  QM316_RS00910 (QM316_00905) - 150555..151112 (-) 558 WP_000477959.1 DUF3267 domain-containing protein -
  QM316_RS00915 (QM316_00910) - 151845..152210 (-) 366 WP_000648118.1 YtxH domain-containing protein -
  QM316_RS00920 (QM316_00915) - 152352..152774 (-) 423 WP_000004981.1 HIT family protein -
  QM316_RS00925 (QM316_00920) pptA 152908..153648 (+) 741 WP_000216874.1 ABC transporter ATP-binding protein Regulator
  QM316_RS00930 (QM316_00925) - 153641..154864 (+) 1224 WP_001245758.1 ABC transporter permease -
  QM316_RS00935 (QM316_00930) - 154992..155069 (-) 78 Protein_155 hypothetical protein -
  QM316_RS00940 (QM316_00935) - 155072..156391 (-) 1320 WP_001807150.1 ISL3-like element IS1181 family transposase -
  QM316_RS00945 (QM316_00940) traP 156481..157011 (-) 531 WP_047213579.1 signal transduction protein TRAP -
  QM316_RS00950 (QM316_00945) - 157197..157283 (+) 87 WP_031875110.1 hypothetical protein -
  QM316_RS00955 (QM316_00950) hemE 157273..158310 (+) 1038 WP_000233535.1 uroporphyrinogen decarboxylase -

Sequence

Protein


Download         Length: 246 a.a.        Molecular weight: 27687.02 Da        Isoelectric Point: 4.6672

>NTDB_id=764405 QM316_RS00925 WP_000216874.1 152908..153648(+) (pptA) [Staphylococcus aureus strain 18-02202-1]
MTVKVEQLTGGYGKRPVIKDINFELNKGEIVGLIGLNGAGKSTTIKHMLGLLTPMEGSLSISDININDDIEAYRRKLSYI
PESPVIYEELTLEEHIEMTAMAYDIDRDEAMNRAMPLLKTFRLENELKVFPSHFSKGMKQKVMIICAFIVNPELYIIDEP
FLGLDPLGIQSMLDLMVEKKNEGRTVLMSTHILATAERYCDRFIILDEGEVVAFGDLEALRQQTGLHNQTLDDIYIHVTQ
GGDVHA

Nucleotide


Download         Length: 741 bp        

>NTDB_id=764405 QM316_RS00925 WP_000216874.1 152908..153648(+) (pptA) [Staphylococcus aureus strain 18-02202-1]
ATGACAGTTAAAGTAGAACAGCTTACAGGTGGATATGGAAAACGCCCTGTAATTAAAGATATAAATTTTGAATTAAACAA
AGGCGAAATCGTTGGACTTATTGGCCTTAATGGCGCTGGTAAGAGTACAACGATTAAACATATGCTAGGATTGCTTACAC
CTATGGAAGGATCTCTATCAATTTCAGATATCAACATTAATGATGACATAGAGGCTTATAGAAGAAAGTTATCTTATATT
CCGGAATCACCGGTTATTTATGAAGAACTCACATTAGAGGAACACATTGAGATGACAGCAATGGCATATGATATTGATCG
TGATGAAGCGATGAATCGAGCAATGCCATTATTAAAGACATTCCGTTTAGAAAATGAATTGAAAGTTTTTCCGAGTCATT
TTTCTAAGGGGATGAAACAAAAAGTCATGATTATTTGTGCGTTTATCGTTAATCCCGAATTGTATATTATAGACGAACCA
TTCCTTGGTCTAGATCCATTAGGAATTCAATCCATGTTAGATTTAATGGTTGAAAAGAAAAATGAAGGTAGAACCGTTCT
AATGAGTACACATATTTTAGCAACAGCTGAACGTTATTGTGATCGTTTTATCATACTAGACGAAGGTGAAGTCGTTGCAT
TTGGAGATTTAGAAGCATTGAGACAACAAACTGGCTTACATAATCAAACGTTAGACGATATATATATTCATGTGACGCAA
GGTGGAGATGTACATGCGTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-161)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

57.322

97.154

0.557
  pptA Streptococcus thermophilus LMD-9

56.067

97.154

0.545