Detailed information NTG0764384

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: O0R52_RS10465
• Genome accession: NZ_CP114066
• Coordinates: 2146588..2147718 (+)
• Length: 376 a.a.
• NCBI ID: WP_044155597.1
• Uniprot ID: -
• Organism: Bacillus halotolerans strain B13
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 2141588..2152718

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
O0R52_RS10425 (O0R52_10425)	-	2141763..2142131 (-)	369	WP_106294154.1	hypothetical protein	-
O0R52_RS10430 (O0R52_10430)	-	2142309..2143052 (-)	744	WP_217827679.1	alpha/beta fold hydrolase	-
O0R52_RS10435 (O0R52_10435)	-	2143292..2143432 (+)	141	WP_217827680.1	hypothetical protein	-
O0R52_RS10440 (O0R52_10440)	-	2143523..2143753 (+)	231	WP_106294150.1	hypothetical protein	-
O0R52_RS22600	-	2143761..2143820 (-)	60	WP_255004945.1	hypothetical protein	-
O0R52_RS10445 (O0R52_10445)	-	2143936..2144082 (-)	147	WP_306173880.1	UPF0715 family protein	-
O0R52_RS10450 (O0R52_10450)	-	2144410..2144555 (-)	146	Protein_2012	helix-turn-helix domain-containing protein	-
O0R52_RS10455 (O0R52_10455)	-	2145825..2146085 (+)	261	WP_082687961.1	hypothetical protein	-
O0R52_RS10465 (O0R52_10465)	rapC	2146588..2147718 (+)	1131	WP_044155597.1	tetratricopeptide repeat protein	Regulator
O0R52_RS10470 (O0R52_10470)	-	2147708..2147851 (+)	144	WP_162264507.1	hypothetical protein	-
O0R52_RS10475 (O0R52_10475)	-	2147898..2148227 (-)	330	Protein_2016	UV damage repair protein UvrX	-
O0R52_RS10480 (O0R52_10480)	ppsA	2148522..2151125 (-)	2604	WP_217827681.1	phosphoenolpyruvate synthase	-
O0R52_RS10485 (O0R52_10485)	-	2151329..2151785 (-)	457	Protein_2018	IS3 family transposase	-

Sequence

Protein

• Length: 376 a.a.
• Molecular weight: 44276.06 Da
• Isoelectric Point: 6.0304

>NTDB_id=764384 O0R52_RS10465 WP_044155597.1 2146588..2147718(+) (rapC) [Bacillus halotolerans strain B13]
MEQLIPSSTVGVKINEWYKYIRMFAVPDAEILKAEVEEEIKHMKEDQDLLLYYSLMCFRHQLMLDYLEPKSLNEARPKIS
DLLEKIESSQTKLKGVLEYYCNFFRGMYEFDKKDYINAIRSYKIAEKKLALVTDEIERAEFYFKMAEVYYHMKQTHVSMH
YAEAALNIYKDQKTYTVRRIQCAFVVAGNFDDLESHEKAVPHLQRALKDSKAINKHKLIGASLYNLGNCYYKMKEYDKAA
EYIDQAVSLYENDKSDLLPHTLFTLTQIHFKMKDIEKALVLYKKGIEKAKAINDDVLIAEFNYLKALYIDSIDKRTVFRT
FSVLKDNVMYPDLEELALDTANYCKEIGQFENSTTFFDVMVDVRIQIQRGECLYEI

Nucleotide

• Length: 1131 bp

>NTDB_id=764384 O0R52_RS10465 WP_044155597.1 2146588..2147718(+) (rapC) [Bacillus halotolerans strain B13]
ATGGAGCAATTAATTCCGTCATCCACGGTTGGAGTTAAAATCAATGAGTGGTATAAATACATACGGATGTTCGCCGTTCC
AGATGCTGAGATATTAAAAGCAGAGGTTGAAGAAGAAATAAAACATATGAAGGAAGATCAAGACTTATTGCTGTATTATT
CTCTAATGTGTTTTCGTCATCAGCTAATGCTGGATTACCTTGAACCTAAGTCATTGAATGAAGCACGCCCTAAAATTTCA
GACTTATTAGAAAAGATCGAAAGCAGCCAAACAAAGCTTAAAGGTGTCCTGGAATACTACTGCAATTTCTTTAGAGGAAT
GTATGAATTTGATAAGAAGGATTATATAAATGCAATAAGGTCATATAAAATTGCTGAGAAAAAGCTCGCTTTAGTAACAG
ATGAAATTGAACGAGCTGAGTTTTATTTCAAAATGGCTGAAGTGTATTATCACATGAAACAAACCCATGTATCAATGCAC
TATGCTGAAGCAGCCCTTAACATTTATAAAGACCAAAAAACTTATACTGTTCGCCGAATACAATGTGCATTTGTTGTAGC
AGGCAACTTTGATGATCTGGAAAGTCATGAAAAAGCAGTTCCCCATCTTCAGAGAGCCCTAAAAGACTCAAAAGCCATAA
ACAAGCACAAACTAATTGGGGCATCATTATATAATTTGGGGAACTGTTATTATAAAATGAAAGAGTATGACAAAGCTGCT
GAATATATTGATCAAGCAGTCTCATTGTACGAAAACGATAAAAGTGATCTTCTCCCTCACACGTTATTTACGCTGACACA
AATTCACTTTAAAATGAAGGATATTGAAAAAGCCTTGGTTCTTTACAAAAAAGGAATCGAGAAAGCAAAAGCAATAAATG
ACGATGTCTTAATTGCTGAGTTTAATTACTTAAAGGCTTTATATATCGACTCTATAGATAAACGCACAGTTTTCCGAACT
TTTTCTGTACTTAAAGATAATGTTATGTATCCAGATTTAGAGGAATTAGCACTCGACACGGCTAATTATTGTAAGGAGAT
AGGGCAATTTGAAAACTCAACCACCTTTTTTGACGTCATGGTGGATGTCCGAATCCAAATACAAAGAGGAGAGTGTTTAT
ATGAAATTTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

• Tetratricopeptide repeat (TPR_12) (221-287)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	50.532	100	0.505
rapF	Bacillus subtilis subsp. subtilis str. 168	45.119	100	0.455