Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   O0R52_RS06205 Genome accession   NZ_CP114066
Coordinates   1263756..1264907 (+) Length   383 a.a.
NCBI ID   WP_256766783.1    Uniprot ID   -
Organism   Bacillus halotolerans strain B13     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 1258756..1269907
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  O0R52_RS06175 (O0R52_06175) - 1259424..1260641 (+) 1218 WP_256766965.1 MFS transporter -
  O0R52_RS06180 (O0R52_06180) - 1260808..1261386 (+) 579 WP_059293039.1 GNAT family N-acetyltransferase -
  O0R52_RS06185 (O0R52_06185) spx 1261566..1261961 (+) 396 WP_024120919.1 transcriptional regulator Spx -
  O0R52_RS06190 (O0R52_06190) - 1262007..1262663 (-) 657 WP_044156385.1 TerC family protein -
  O0R52_RS06195 (O0R52_06195) - 1262835..1262975 (+) 141 WP_125825429.1 hypothetical protein -
  O0R52_RS06200 (O0R52_06200) mecA 1262942..1263598 (+) 657 WP_024120921.1 adaptor protein MecA Regulator
  O0R52_RS06205 (O0R52_06205) coiA 1263756..1264907 (+) 1152 WP_256766783.1 competence protein CoiA family protein Machinery gene
  O0R52_RS06210 (O0R52_06210) pepF 1265137..1266966 (+) 1830 WP_176471078.1 oligoendopeptidase F -
  O0R52_RS06215 (O0R52_06215) - 1267003..1267170 (-) 168 WP_024120925.1 hypothetical protein -
  O0R52_RS06220 (O0R52_06220) spxH 1267484..1268383 (-) 900 WP_044156379.1 protease adaptor protein SpxH -
  O0R52_RS06225 (O0R52_06225) - 1268380..1268778 (-) 399 WP_010333756.1 thiol management oxidoreductase -
  O0R52_RS06230 (O0R52_06230) - 1269035..1269766 (-) 732 WP_059336268.1 lytic transglycosylase domain-containing protein -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 44815.90 Da        Isoelectric Point: 9.7675

>NTDB_id=764373 O0R52_RS06205 WP_256766783.1 1263756..1264907(+) (coiA) [Bacillus halotolerans strain B13]
MFSAVTEDGQVFHLIGRQRREQLKQTRFFCPVCAEELDVKLGSQKAPHFAHKQNKSCTIDIEPESAYHLEGKRQLYVWLK
TQKASPLLEPYVKEIKQRPDILAKVKGDTLAVEYQCATLAPDVFQKRTAGFKQAGMIPQWILGGSRLKRTSSSFYQLSDF
HWQFINASPNSDLLCYCPETHSFLRLSRMIPFYTTHFYCSVQTIPIRQAAAEDLFFTEPDSSFKHSDWTGAILRFRRKTH
RFLSKDMNRIRLLFYEKRQTPLSFLPTEVFVPVKKGAVFKSPVFVWQGYLYLFITDLGYKHAPIRFSAVLQHCKIHIHKK
NILLRGVYRDQDFIEAVKQYIEFLCKKGFLRETQKEVYVLDQPAKRSQSLQDLIEKDRSCFIE

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=764373 O0R52_RS06205 WP_256766783.1 1263756..1264907(+) (coiA) [Bacillus halotolerans strain B13]
TTGTTTAGTGCTGTGACAGAAGACGGCCAAGTGTTTCACCTCATAGGCAGGCAGAGGAGAGAACAATTAAAGCAGACCAG
GTTTTTCTGCCCGGTGTGTGCTGAGGAGCTCGATGTGAAGCTAGGGTCTCAGAAAGCGCCGCATTTTGCCCATAAACAGA
ACAAGTCCTGCACGATAGACATAGAACCTGAGAGCGCCTATCACTTAGAAGGAAAACGGCAGCTTTATGTATGGCTGAAA
ACGCAAAAGGCTTCCCCGCTCTTAGAGCCGTACGTGAAAGAGATTAAACAAAGGCCCGACATCTTGGCAAAAGTAAAGGG
GGATACGCTTGCAGTTGAATACCAATGCGCGACTCTCGCTCCAGATGTCTTTCAAAAAAGAACAGCCGGTTTCAAACAAG
CAGGAATGATACCGCAGTGGATTCTTGGAGGCAGCCGCTTAAAACGGACATCATCATCCTTTTACCAGCTGTCCGATTTC
CATTGGCAGTTTATCAATGCCAGTCCGAACAGTGATCTGTTATGTTACTGCCCCGAAACACATTCTTTCCTGAGGCTCAG
CCGCATGATCCCGTTTTACACAACCCATTTTTACTGCTCCGTCCAAACGATTCCAATCCGCCAGGCAGCGGCTGAAGATT
TATTTTTCACTGAACCAGATTCGTCGTTTAAGCACTCAGATTGGACAGGAGCCATTCTCCGTTTTCGCCGCAAAACTCAT
CGGTTTCTCTCTAAAGATATGAATCGGATCAGGCTTCTGTTTTATGAAAAACGGCAAACACCTCTCTCTTTTCTTCCGAC
AGAGGTGTTTGTTCCTGTAAAGAAAGGAGCTGTTTTTAAGAGTCCCGTTTTTGTATGGCAGGGCTATCTTTATCTGTTTA
TTACGGATCTTGGATATAAACATGCGCCCATTCGCTTTTCAGCCGTTTTGCAGCACTGCAAAATACACATTCATAAAAAG
AACATTCTGCTAAGAGGCGTATACAGGGATCAGGATTTCATTGAGGCGGTTAAACAGTACATTGAGTTTTTGTGCAAGAA
GGGATTTTTGAGGGAGACTCAGAAAGAAGTATATGTGCTGGATCAGCCCGCAAAGCGCAGCCAATCATTACAGGATCTCA
TTGAAAAAGACAGAAGCTGTTTTATCGAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

75.603

97.389

0.736