Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   OZ415_RS06465 Genome accession   NZ_CP114063
Coordinates   1343690..1345465 (-) Length   591 a.a.
NCBI ID   WP_269104541.1    Uniprot ID   A0AA47G9W5
Organism   Aerococcus urinaeequi strain 2020-HN-1     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1338690..1350465
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OZ415_RS06435 (OZ415_06435) - 1339023..1339283 (-) 261 WP_016896863.1 metal-sensitive transcriptional regulator -
  OZ415_RS06440 (OZ415_06440) - 1339283..1339579 (-) 297 WP_016896862.1 rhodanese-like domain-containing protein -
  OZ415_RS06445 (OZ415_06445) - 1339579..1341231 (-) 1653 WP_269104539.1 FAD-dependent oxidoreductase -
  OZ415_RS06450 (OZ415_06450) - 1341231..1341536 (-) 306 WP_003141799.1 rhodanese-like domain-containing protein -
  OZ415_RS06455 (OZ415_06455) - 1341558..1341743 (-) 186 WP_034258245.1 membrane protein insertion efficiency factor YidD -
  OZ415_RS06460 (OZ415_06460) rcrQ 1341934..1343697 (-) 1764 WP_269104540.1 ABC transporter ATP-binding protein Regulator
  OZ415_RS06465 (OZ415_06465) rcrP 1343690..1345465 (-) 1776 WP_269104541.1 ABC transporter ATP-binding protein Regulator
  OZ415_RS06470 (OZ415_06470) - 1345494..1345943 (-) 450 WP_269104542.1 MarR family winged helix-turn-helix transcriptional regulator -
  OZ415_RS06475 (OZ415_06475) purD 1346205..1347458 (-) 1254 WP_269104543.1 phosphoribosylamine--glycine ligase -
  OZ415_RS06480 (OZ415_06480) purH 1347489..1349009 (-) 1521 WP_269104544.1 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase -
  OZ415_RS06485 (OZ415_06485) purN 1349062..1349625 (-) 564 WP_269104545.1 phosphoribosylglycinamide formyltransferase -

Sequence

Protein


Download         Length: 591 a.a.        Molecular weight: 65369.38 Da        Isoelectric Point: 4.5977

>NTDB_id=764334 OZ415_RS06465 WP_269104541.1 1343690..1345465(-) (rcrP) [Aerococcus urinaeequi strain 2020-HN-1]
MLKILAKANKKEKFFALLSVLLIMLQVYLELEIPDYMSEITELLQMPDTVTADIWEPGLIMVGLSLASFASAILVGFFAA
RIAASLTARIRGEVFDKVMSYSANEINQFSVPSLVTRSTNDLTQIQMLIALGLQVVLRGPIMSIWAIAKISGQNWQWSMT
TAVAVGVLLVMIGFIMYFAVPRFSKIQTLTDNLNAVTRENLTGLRVIRAYNAEEYQNKKFAKANDDLTNTQLFVNRVMGI
MQPGMTLVSSSLTLVVYWSGAYLIADAAQGTAQINLFSDMVVFSSYAMQVIIGFLLMVMIFMILPRAIVSAKRINEVLDL
APSIDFKEDAIQTSEQGSVEFKNVTFKYGDDAKPALKDINFKINKGETLAIIGSTGSGKSTLIQMIPRLYDVSEGQVLVD
GQNVKDFDHAGLNNIVGYMPQKPVLFSGTIRSNMNLGESNEHLEHESLSDDEIWAALDTAQARDFVEGEPDQLDTHVAQG
GNNFSGGQKQRLGIARVLARKPEILIFDDSFSALDYQTDKTLRGVLAERMADTTKIIVAQRISTIMDADEILVLDRGEIV
GRGTHQELLADNKVYQEIAYSQLSEEELAND

Nucleotide


Download         Length: 1776 bp        

>NTDB_id=764334 OZ415_RS06465 WP_269104541.1 1343690..1345465(-) (rcrP) [Aerococcus urinaeequi strain 2020-HN-1]
GTGCTAAAAATATTAGCGAAAGCAAATAAAAAGGAAAAATTTTTCGCTTTACTAAGCGTGCTGCTGATTATGCTGCAAGT
ATACTTAGAGTTAGAAATCCCTGACTACATGTCAGAAATTACAGAATTACTACAAATGCCAGATACCGTGACAGCGGATA
TTTGGGAACCAGGTTTAATCATGGTTGGTTTATCACTAGCATCTTTTGCCTCTGCTATATTGGTAGGTTTTTTTGCTGCA
CGTATTGCTGCAAGTTTAACTGCCCGTATTCGTGGGGAAGTGTTTGATAAAGTCATGAGCTATTCAGCCAATGAAATCAA
CCAATTTTCAGTGCCAAGTTTAGTGACGCGTTCTACCAATGACTTGACCCAAATCCAAATGTTGATTGCTTTAGGACTAC
AAGTCGTTTTACGGGGACCAATCATGTCCATTTGGGCGATTGCGAAAATTTCCGGTCAAAACTGGCAATGGTCAATGACA
ACTGCTGTCGCTGTGGGTGTTTTATTAGTGATGATTGGATTTATCATGTACTTCGCTGTTCCTCGTTTCAGCAAAATCCA
AACCCTGACCGATAATTTAAATGCCGTGACTCGTGAAAACTTAACTGGTTTACGCGTTATTAGAGCTTACAATGCAGAAG
AATATCAAAATAAAAAATTCGCAAAAGCTAATGACGACTTAACCAATACACAACTCTTTGTTAACCGTGTAATGGGGATC
ATGCAACCCGGTATGACCCTTGTATCCAGCAGTTTAACCCTAGTAGTGTACTGGTCAGGTGCTTACTTAATCGCCGATGC
AGCGCAAGGAACAGCGCAAATTAACTTATTCTCAGACATGGTTGTCTTCTCATCTTACGCCATGCAAGTCATCATCGGAT
TTCTGTTGATGGTCATGATCTTCATGATTTTACCGCGTGCCATCGTTTCGGCAAAACGGATCAACGAAGTGCTTGATCTA
GCACCATCCATTGATTTTAAAGAAGATGCGATTCAAACAAGTGAACAAGGATCTGTTGAATTCAAAAACGTCACTTTTAA
ATATGGTGATGATGCCAAACCAGCCCTTAAAGATATCAATTTCAAAATCAACAAGGGTGAAACCTTAGCCATTATCGGAT
CAACTGGTTCAGGTAAATCGACTTTAATCCAAATGATTCCACGTCTATACGACGTATCTGAAGGACAAGTACTTGTCGAT
GGGCAAAATGTCAAAGACTTTGACCACGCTGGATTGAATAATATTGTTGGCTACATGCCACAAAAACCAGTTCTATTTTC
AGGCACAATTCGTTCAAATATGAACCTTGGTGAAAGTAACGAACACCTTGAACATGAGTCCTTATCAGACGATGAAATTT
GGGCTGCCTTAGACACTGCACAAGCAAGAGACTTTGTTGAAGGAGAACCTGACCAATTAGATACCCATGTTGCCCAAGGT
GGTAACAACTTCTCCGGTGGTCAAAAGCAACGTTTAGGGATTGCCCGCGTACTTGCCCGTAAACCTGAGATTCTAATCTT
TGATGACTCATTCTCTGCTTTGGACTACCAGACAGATAAGACCTTGCGTGGCGTTTTAGCCGAACGTATGGCTGACACCA
CTAAGATCATTGTAGCCCAACGTATTTCAACTATTATGGATGCGGACGAGATTTTAGTACTAGATAGAGGCGAAATTGTT
GGCCGCGGTACACACCAAGAATTATTAGCGGATAACAAGGTATACCAAGAAATTGCTTATTCACAATTATCAGAGGAGGA
ATTAGCAAATGACTAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(18-290)

ABC transporter (ABC_tran)

(356-510)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

56.312

100

0.574