Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   OZ415_RS06460 Genome accession   NZ_CP114063
Coordinates   1341934..1343697 (-) Length   587 a.a.
NCBI ID   WP_269104540.1    Uniprot ID   A0AA47J0X9
Organism   Aerococcus urinaeequi strain 2020-HN-1     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1336934..1348697
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OZ415_RS06430 (OZ415_06430) dfrG 1338149..1338646 (-) 498 WP_000868795.1 trimethoprim-resistant dihydrofolate reductase DfrG -
  OZ415_RS06435 (OZ415_06435) - 1339023..1339283 (-) 261 WP_016896863.1 metal-sensitive transcriptional regulator -
  OZ415_RS06440 (OZ415_06440) - 1339283..1339579 (-) 297 WP_016896862.1 rhodanese-like domain-containing protein -
  OZ415_RS06445 (OZ415_06445) - 1339579..1341231 (-) 1653 WP_269104539.1 FAD-dependent oxidoreductase -
  OZ415_RS06450 (OZ415_06450) - 1341231..1341536 (-) 306 WP_003141799.1 rhodanese-like domain-containing protein -
  OZ415_RS06455 (OZ415_06455) - 1341558..1341743 (-) 186 WP_034258245.1 membrane protein insertion efficiency factor YidD -
  OZ415_RS06460 (OZ415_06460) rcrQ 1341934..1343697 (-) 1764 WP_269104540.1 ABC transporter ATP-binding protein Regulator
  OZ415_RS06465 (OZ415_06465) rcrP 1343690..1345465 (-) 1776 WP_269104541.1 ABC transporter ATP-binding protein Regulator
  OZ415_RS06470 (OZ415_06470) - 1345494..1345943 (-) 450 WP_269104542.1 MarR family winged helix-turn-helix transcriptional regulator -
  OZ415_RS06475 (OZ415_06475) purD 1346205..1347458 (-) 1254 WP_269104543.1 phosphoribosylamine--glycine ligase -

Sequence

Protein


Download         Length: 587 a.a.        Molecular weight: 64772.34 Da        Isoelectric Point: 4.5892

>NTDB_id=764333 OZ415_RS06460 WP_269104540.1 1341934..1343697(-) (rcrQ) [Aerococcus urinaeequi strain 2020-HN-1]
MTKKKDANQPSLMANIMTYAREYKWPFVAAVVLAMIGSISSIIGPDRLGDMTDKITEGLMSPDGIDLERITQIAITLVVI
YVLGAVFTYIQTFLMATIIQNFSKKLRKNVSDKIDRLTLRYFDSHSHGDTLSRVTNDLDLVGQSLNQTMPSFIPSVTLLI
GTLVMMFYNNAILTLVALVSVVIGFAGIVLILGRSQGYFISQQKNLANVNSIAEESYTGQSVLTTINARNQMTETFSEAN
EALYDSVWHAQFLSGIMQPLMQFIGNFGYVAVSVVGSIMALNGDITFGVIVSFMVYVRMFTQPLGQLSQSFASFQSASAA
LNRVFEFLNEEEMVEETNLLSELPDVHGDVTFEHVNFGYEADQPIIKDFSVTAKSGQKIAIVGPTGAGKTTIVNLLMKFY
PIDSGEIYIDGKPTSEISRAAVHDQFSMVLQDTWLFEGTIRENLIFNQDHITDEMVESAAAAVGIDHFINTLPKGYDTVL
DDSVTLSVGQKQLFTIARALLKDAPLLILDEATSSVDTRTEVLLQEAMDKLMEGRTSFVIAHRLSTIRNADIILVMDHGN
IIEQGNHEALMAKGGFYADLYNSQFAK

Nucleotide


Download         Length: 1764 bp        

>NTDB_id=764333 OZ415_RS06460 WP_269104540.1 1341934..1343697(-) (rcrQ) [Aerococcus urinaeequi strain 2020-HN-1]
ATGACTAAGAAAAAAGATGCAAATCAACCTTCATTGATGGCGAATATTATGACATATGCGCGTGAATACAAATGGCCGTT
CGTTGCAGCGGTTGTCCTAGCCATGATTGGTTCTATATCGTCTATTATCGGTCCCGACCGGTTAGGGGATATGACAGATA
AAATCACGGAAGGCTTGATGTCACCAGATGGGATTGACTTAGAGCGTATTACACAAATTGCAATTACTTTAGTGGTTATC
TATGTCCTTGGGGCTGTATTCACTTATATTCAAACCTTCTTGATGGCAACGATTATTCAAAACTTTTCAAAAAAATTACG
GAAGAATGTATCCGATAAAATTGACCGTTTGACTTTACGCTATTTTGATAGCCATAGTCACGGGGATACCTTAAGTCGGG
TAACCAACGACTTGGACTTGGTTGGACAATCACTTAACCAAACCATGCCGTCATTTATCCCATCAGTGACTTTACTGATT
GGTACCCTAGTGATGATGTTCTACAACAACGCGATTCTAACCCTAGTAGCCTTGGTTTCTGTGGTTATTGGTTTCGCAGG
AATTGTCCTCATTCTAGGCCGTTCTCAAGGTTATTTCATTTCACAACAAAAAAATCTAGCCAATGTGAACAGTATTGCTG
AAGAGTCATACACTGGTCAAAGTGTTTTAACAACTATTAACGCCCGTAACCAAATGACTGAAACCTTCAGCGAAGCGAAC
GAAGCTTTATATGATAGCGTTTGGCATGCCCAATTCTTGTCAGGTATCATGCAACCGTTGATGCAATTCATCGGAAACTT
TGGTTATGTAGCTGTCTCTGTTGTCGGTTCAATTATGGCCTTAAATGGCGACATTACCTTCGGGGTAATTGTGTCATTCA
TGGTTTACGTCCGTATGTTCACTCAACCACTAGGTCAATTATCACAATCATTCGCCTCATTCCAATCTGCGTCAGCAGCC
TTAAATCGTGTATTTGAGTTTCTAAATGAAGAGGAAATGGTAGAAGAAACAAACCTATTGAGCGAATTGCCGGATGTCCA
CGGTGACGTGACTTTCGAACACGTAAACTTCGGTTATGAAGCAGATCAACCGATTATCAAAGACTTCTCAGTAACCGCTA
AATCAGGTCAGAAGATTGCTATCGTAGGACCTACCGGAGCTGGGAAAACGACAATCGTCAACTTACTGATGAAATTCTAT
CCAATCGACTCAGGTGAAATTTACATTGATGGGAAACCTACCAGTGAAATTTCACGTGCAGCTGTGCACGACCAATTCTC
AATGGTGTTACAAGATACTTGGTTATTTGAAGGCACCATTCGTGAGAACTTAATCTTCAACCAAGACCACATTACCGATG
AAATGGTTGAATCAGCAGCCGCTGCAGTAGGTATTGACCACTTTATCAATACATTACCTAAAGGCTATGATACTGTATTA
GACGACTCTGTAACCTTATCAGTAGGGCAAAAACAATTATTTACGATTGCGCGCGCCTTGTTGAAAGATGCACCTTTATT
GATATTAGATGAAGCGACATCTTCAGTCGATACACGTACAGAAGTCTTATTACAAGAAGCCATGGACAAACTAATGGAAG
GTAGAACATCATTTGTGATTGCCCACCGTTTATCAACTATCCGTAACGCTGATATTATCTTAGTTATGGACCACGGTAAT
ATCATTGAACAAGGTAATCATGAGGCTTTAATGGCTAAGGGTGGCTTCTATGCAGACCTTTATAACAGTCAGTTTGCAAA
ATAG

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(29-304)

ABC transporter (ABC_tran)

(367-514)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

59.828

98.807

0.591