Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   OZ415_RS02950 Genome accession   NZ_CP114063
Coordinates   584457..586253 (+) Length   598 a.a.
NCBI ID   WP_269105336.1    Uniprot ID   A0AA47GBW8
Organism   Aerococcus urinaeequi strain 2020-HN-1     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 579457..591253
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OZ415_RS02930 (OZ415_02930) - 580501..581202 (-) 702 WP_016897705.1 adaptor protein MecA -
  OZ415_RS02935 (OZ415_02935) spxA 581332..581748 (-) 417 WP_016897704.1 transcriptional regulator SpxA -
  OZ415_RS02940 (OZ415_02940) trpS 581963..582958 (+) 996 WP_059134712.1 tryptophan--tRNA ligase -
  OZ415_RS02945 (OZ415_02945) - 583292..584389 (+) 1098 WP_269105335.1 competence protein CoiA -
  OZ415_RS02950 (OZ415_02950) pepF 584457..586253 (+) 1797 WP_269105336.1 oligoendopeptidase F Regulator
  OZ415_RS02955 (OZ415_02955) - 586375..587070 (-) 696 WP_269105337.1 DsbA family protein -
  OZ415_RS02960 (OZ415_02960) - 587289..587879 (-) 591 WP_269105338.1 CYTH domain-containing protein -
  OZ415_RS02965 (OZ415_02965) - 588088..588789 (+) 702 WP_048726671.1 GTP pyrophosphokinase family protein -
  OZ415_RS02970 (OZ415_02970) - 588882..589721 (+) 840 WP_016897697.1 NAD kinase -
  OZ415_RS02975 (OZ415_02975) - 589804..590685 (+) 882 WP_069285650.1 RluA family pseudouridine synthase -

Sequence

Protein


Download         Length: 598 a.a.        Molecular weight: 67855.50 Da        Isoelectric Point: 4.5097

>NTDB_id=764321 OZ415_RS02950 WP_269105336.1 584457..586253(+) (pepF) [Aerococcus urinaeequi strain 2020-HN-1]
MAKIFEVKPRNEVDSAFQWDLTSIFPDDRAFENSLSGFPKKADAFQDYKGTLDQGADQVVTVLESLLAVSRELESLYVYA
HLKHDQDTGDNKYLTYNSQAGALLAQVSEKISWFEPEVLAVSEDVQKTLEDHSEYGHFFRELFAKKAHVLSPSEEALLAG
ASEIFGVSSTTFSLLNNADLKFGKVKDEEGNDVTLSHGSYGVLLESADRSVRENAFKQLYATYEGVKNTNASLMSGNIKG
HNYTAKIRHYDSARQKALDNNNIPESVYDTLVDTVRKNTNLLHEYVALRKDMLGLDDLQMWDMYTPLTGDAPVKFTYEEA
KEITFKALAPLGDQYLKDLAKAFDEKWIDVYENEGKRSGAYSSGAYDTNPYILLNWQDSLNDLYTLVHELGHSMHSYYTR
SNQPYVYGDYSIFVAEIASTTNENLLTSYLLDTIEDKDAQIYILNHYLDGVKGTIFRQTQFAEFEKFMHESDANGQPLTA
DFLSENYFELNKAYYGPSIGEDKTIALEWSRIPHFYMNYYVYQYATGFSAANTLAKRLVEGEEGAVDKYLTYLKSGSSDF
PINVMQKAGIDMTNATYIEETFAQFEQRLAELKDLLNK

Nucleotide


Download         Length: 1797 bp        

>NTDB_id=764321 OZ415_RS02950 WP_269105336.1 584457..586253(+) (pepF) [Aerococcus urinaeequi strain 2020-HN-1]
ATGGCAAAAATTTTTGAAGTAAAACCTAGAAATGAAGTAGACAGTGCGTTTCAATGGGATTTAACCAGTATCTTCCCAGA
TGATCGAGCTTTTGAGAATTCCTTAAGTGGATTCCCAAAAAAAGCGGATGCTTTTCAAGACTATAAAGGCACTCTAGATC
AAGGCGCTGACCAAGTGGTAACCGTATTAGAGTCCTTATTAGCGGTGAGCCGTGAATTGGAATCCCTATACGTTTATGCA
CATTTAAAACATGACCAAGATACAGGAGACAACAAGTACCTAACTTACAACAGTCAAGCAGGTGCCTTACTTGCTCAAGT
TAGTGAAAAGATCTCTTGGTTTGAACCAGAAGTATTAGCAGTATCTGAAGATGTACAAAAAACTTTGGAAGACCACTCTG
AATACGGTCACTTCTTCCGTGAGTTATTTGCGAAGAAGGCGCATGTCTTATCACCAAGTGAAGAGGCTTTACTTGCTGGT
GCTAGCGAAATATTTGGTGTCTCTTCAACAACTTTCTCACTTTTAAACAATGCCGACTTAAAATTCGGTAAAGTCAAAGA
TGAAGAGGGCAATGATGTTACCCTTTCTCACGGTTCATACGGTGTCCTACTAGAAAGTGCAGACCGTTCTGTTCGAGAAA
ATGCCTTTAAACAACTTTATGCAACTTATGAAGGGGTTAAAAATACCAACGCTTCATTGATGTCAGGTAATATTAAAGGA
CATAATTATACCGCTAAAATTCGTCACTACGATTCAGCACGTCAAAAAGCTTTAGACAACAACAATATTCCAGAAAGTGT
TTATGACACATTAGTCGATACAGTAAGAAAGAATACAAATCTATTACATGAATATGTTGCCTTAAGAAAAGACATGCTAG
GTCTTGATGACTTACAAATGTGGGATATGTATACACCATTAACAGGTGATGCACCGGTGAAATTTACTTACGAAGAAGCT
AAAGAGATTACCTTTAAAGCTTTAGCGCCTTTAGGTGACCAATACTTGAAAGACTTGGCCAAAGCCTTTGATGAGAAATG
GATCGATGTTTATGAGAATGAAGGTAAGCGTTCAGGAGCATACTCATCAGGTGCATATGATACCAACCCATATATCTTAC
TAAACTGGCAAGATTCACTGAATGACTTGTATACATTAGTTCATGAGTTAGGTCACTCAATGCACTCTTATTACACTAGA
AGTAACCAACCATACGTATATGGGGACTACTCAATTTTCGTAGCAGAAATTGCCTCTACGACAAACGAAAATTTATTAAC
TTCATATTTATTGGATACGATTGAAGATAAGGATGCACAAATCTATATCTTGAACCACTATCTTGATGGGGTAAAAGGGA
CAATCTTCCGTCAAACTCAGTTTGCTGAATTTGAAAAATTCATGCATGAATCAGATGCAAACGGACAACCTTTAACAGCA
GACTTCTTAAGTGAAAACTACTTCGAATTAAACAAGGCCTACTACGGTCCGTCAATCGGAGAGGATAAAACAATCGCTTT
AGAATGGTCTCGTATTCCTCACTTCTACATGAACTACTATGTTTACCAATATGCAACAGGATTCTCTGCTGCCAACACAT
TGGCTAAACGTTTAGTAGAAGGTGAAGAGGGTGCCGTTGACAAGTACTTAACTTACCTGAAATCAGGTTCATCTGATTTC
CCAATTAATGTTATGCAAAAAGCGGGTATCGATATGACCAATGCCACTTATATCGAAGAAACCTTTGCCCAATTCGAGCA
AAGATTAGCTGAATTAAAAGACTTATTAAACAAATAG

Domains

Predicted by InterproScan.

Oligopeptidase F (Peptidase_M3_N)

(123-182)

Peptidase family M3 (Peptidase_M3)

(203-583)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

50.168

99.666

0.5