Detailed information NTG0764269

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: O0R51_RS04825
• Genome accession: NZ_CP114055
• Coordinates: 1038309..1039424 (+)
• Length: 371 a.a.
• NCBI ID: WP_160224123.1
• Uniprot ID: A0A6P1QWZ6
• Organism: Bergeyella cardium strain BCV
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1033309..1044424

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
O0R51_RS04785 (O0R51_04780)	-	1033443..1034351 (+)	909	WP_160224117.1	GYDIA family GHMP kinase	-
O0R51_RS04790 (O0R51_04785)	-	1034518..1034844 (+)	327	WP_160224118.1	hypothetical protein	-
O0R51_RS04795 (O0R51_04790)	-	1034856..1035056 (+)	201	WP_160224119.1	hypothetical protein	-
O0R51_RS04800 (O0R51_04795)	-	1035353..1035694 (+)	342	WP_160224120.1	hypothetical protein	-
O0R51_RS04805 (O0R51_04800)	-	1035804..1036172 (+)	369	WP_120489817.1	hypothetical protein	-
O0R51_RS04810 (O0R51_04805)	-	1036182..1037165 (+)	984	WP_160224121.1	aminoglycoside phosphotransferase family protein	-
O0R51_RS04815 (O0R51_04810)	-	1037168..1037572 (+)	405	WP_120489815.1	RNase adapter RapZ	-
O0R51_RS04820 (O0R51_04815)	-	1037584..1038297 (+)	714	WP_160224122.1	sugar phosphate nucleotidyltransferase	-
O0R51_RS04825 (O0R51_04820)	dprA	1038309..1039424 (+)	1116	WP_160224123.1	DNA-processing protein DprA	Machinery gene
O0R51_RS04830 (O0R51_04825)	gdhA	1039614..1040973 (+)	1360	Protein_940	NADP-specific glutamate dehydrogenase	-
O0R51_RS04835 (O0R51_04830)	-	1041142..1043283 (-)	2142	WP_160224124.1	S46 family peptidase	-
O0R51_RS04840 (O0R51_04835)	-	1043438..1043572 (+)	135	WP_160224125.1	DUF4469 domain-containing protein	-

Sequence

Protein

• Length: 371 a.a.
• Molecular weight: 41219.03 Da
• Isoelectric Point: 7.0075

>NTDB_id=764269 O0R51_RS04825 WP_160224123.1 1038309..1039424(+) (dprA) [Bergeyella cardium strain BCV]
MFSEEHLYSIALRSCKNIGDANFRKLINAFGSASSVWNADKRQLTKVYGISQGMISEIGSSEHLDFAKRELDFCEKNNIQ
ILLRHSGELPFFLDDCIDAPAILYKKGAINENLIPVSIVGTRNMTAYGKDFIRYFLSITKEMNLLTVSGLAYGVDSEVHQ
QSVGNDVPTVAVLAHGLHTLYPSKNKRLSEQILERCGALITEFNSSHKPDREHFIQRNRIIAGISRNLIVVETAFGGGSI
STATFANGYNREVYALPGRITDKYSQGCNHLIYQNKAGTISSVKTLIDNLGLKVPSEAESTGELFPQKSVKVQLSGMQKT
LYDIIESHPKINLDDLAEKSDLQTYEILPVLLELEILGYIKSFSGRQFAVS

Nucleotide

• Length: 1116 bp

>NTDB_id=764269 O0R51_RS04825 WP_160224123.1 1038309..1039424(+) (dprA) [Bergeyella cardium strain BCV]
ATGTTTTCGGAAGAGCATCTTTATTCCATCGCCCTACGCTCCTGTAAAAATATAGGAGATGCTAATTTCCGAAAGCTCAT
AAATGCTTTTGGAAGTGCTTCCTCCGTGTGGAATGCAGATAAAAGACAGCTTACAAAAGTCTATGGTATTTCTCAGGGAA
TGATTTCCGAGATAGGCTCATCTGAGCATTTAGACTTTGCAAAGAGGGAATTAGACTTCTGTGAGAAGAATAATATTCAG
ATTCTACTTCGGCACAGTGGTGAGCTCCCTTTTTTCTTAGATGATTGTATAGATGCTCCTGCGATCCTCTATAAAAAAGG
AGCTATCAATGAGAATCTTATACCTGTGAGCATCGTTGGTACCCGCAATATGACGGCTTATGGTAAGGACTTTATAAGAT
ACTTCCTGTCTATCACCAAAGAGATGAACCTCCTTACAGTGAGCGGACTTGCCTATGGTGTAGATTCAGAAGTGCATCAG
CAGTCTGTGGGGAATGATGTACCTACTGTTGCAGTGCTTGCACACGGTCTCCACACTCTTTACCCATCTAAGAATAAGCG
CTTGTCTGAGCAGATATTAGAGCGATGCGGTGCTTTAATTACAGAATTTAATTCTTCCCATAAACCCGACAGGGAGCATT
TCATCCAGAGGAATAGAATTATAGCGGGTATTTCCAGAAACTTAATCGTAGTAGAAACTGCTTTTGGTGGGGGCTCTATC
AGTACGGCGACTTTTGCCAATGGCTATAACAGGGAAGTCTATGCTTTGCCAGGTCGTATCACAGATAAGTACAGTCAAGG
CTGTAATCATCTTATTTATCAGAATAAGGCGGGGACTATTTCCAGTGTTAAAACTCTTATTGATAATCTCGGTTTGAAAG
TCCCATCAGAAGCCGAAAGCACAGGTGAACTCTTCCCTCAGAAATCGGTTAAGGTACAACTCTCAGGAATGCAGAAAACA
CTCTATGATATTATAGAGAGCCACCCTAAAATCAATTTGGATGACCTTGCTGAGAAATCCGATTTACAGACCTATGAAAT
CCTCCCTGTTTTACTTGAACTCGAAATCTTGGGGTATATTAAGTCTTTTTCGGGAAGGCAATTTGCGGTTTCTTAG

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (74-277)

• DprA winged helix domain (DprA_WH) (314-365)

3D structure

• AlphaFold DB: A0A6P1QWZ6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Riemerella anatipestifer ATCC 11845 = DSM 15868	52.989	99.191	0.526