Detailed information NTG0764178

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: OZA25_RS09260
• Genome accession: NZ_CP114038
• Coordinates: 1796906..1799284 (+)
• Length: 792 a.a.
• NCBI ID: WP_032873862.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain B8
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1791906..1804284

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OZA25_RS09235 (OZA25_09235)	-	1791990..1793258 (-)	1269	WP_029326053.1	replication-associated recombination protein A	-
OZA25_RS09240 (OZA25_09240)	cymR	1793453..1793869 (+)	417	WP_003152730.1	cysteine metabolism transcriptional regulator CymR	-
OZA25_RS09245 (OZA25_09245)	-	1793888..1795027 (+)	1140	WP_032873857.1	cysteine desulfurase family protein	-
OZA25_RS09250 (OZA25_09250)	mnmA	1795064..1796179 (+)	1116	WP_012118077.1	tRNA 2-thiouridine(34) synthase MnmA	-
OZA25_RS09255 (OZA25_09255)	-	1796267..1796887 (+)	621	WP_087920803.1	tetratricopeptide repeat protein	-
OZA25_RS09260 (OZA25_09260)	recD2	1796906..1799284 (+)	2379	WP_032873862.1	ATP-dependent RecD-like DNA helicase	Machinery gene
OZA25_RS09265 (OZA25_09265)	-	1799403..1799858 (+)	456	WP_032873866.1	PRC-barrel domain-containing protein	-
OZA25_RS09270 (OZA25_09270)	-	1799871..1800062 (+)	192	WP_003152738.1	hypothetical protein	-
OZA25_RS09275 (OZA25_09275)	-	1800084..1800215 (+)	132	WP_003152741.1	YrzQ family protein	-
OZA25_RS09280 (OZA25_09280)	-	1800251..1800907 (-)	657	WP_032873869.1	amino acid ABC transporter permease	-
OZA25_RS09285 (OZA25_09285)	-	1800926..1801576 (-)	651	WP_032873872.1	amino acid ABC transporter permease	-
OZA25_RS09290 (OZA25_09290)	-	1801633..1802460 (-)	828	WP_007408208.1	transporter substrate-binding domain-containing protein	-
OZA25_RS09295 (OZA25_09295)	-	1802481..1803209 (-)	729	WP_032873875.1	amino acid ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 792 a.a.
• Molecular weight: 88366.06 Da
• Isoelectric Point: 4.9870

>NTDB_id=764178 OZA25_RS09260 WP_032873862.1 1796906..1799284(+) (recD2) [Bacillus velezensis strain B8]
MDQLNIEEQPYVKGIIHTVIYHNDTNLYTVLKVKVAETSEAIEDKVVSVTGYFPLLQEDETYTFYGKTATHPKFGLQFQA
EHFKKEIPTTKEGIIHYLSSDLFEGIGKKTAEEIVKKLGDGALNKILTDASVLYDVPKMSKKKADKLAGELQRHQGLEQI
MISLNQYGFGPQLSMKIYQAYETETLEKIQENPYQLVKDVEGIGFVKADELGGKMGLSGNHPERIKAAILYTIESTCLSE
GHTYIETKQLIINTQTLLNQSAEGGRVTEMDAADGIIALGESKDIVIEGERCYFPSLFYAEQNVAKRVLDIAAQTEYADQ
FPESEFLLALGELEERMNVQYAPSQKDAIQKALSSPMLLLTGGPGTGKTTVIKGIVELYSELHGVSLDPGDYKKDEAFPL
LLAAPTGRAAKRMSESTGLPAVTIHRLLGWNGAEGFTYNEDQPIEGKLIIIDEASMLDIWLASHLFKALPKHIQLIVVGD
EDQLPSVGPGQVLRDLLASEVLPTVRLTDIYRQAEGSSIVELAHDMKKGLLPKGLTAPTKDRSFIRCNSSQIKEVVDQVV
SNALKKGYTSRDIQVLAPMYRGKAGINELNMLLQDIMNPPKEKRRELKFGDVVYRTGDKILQLVNQPENNVFNGDIGEIV
SIFYAKENTEKEDMVVVSFDGNEITFTKKDFSQFTHAYCCSIHKSQGSEFPIVVLPVVKGYYRMLRRNLLYTAITRAKKF
LILCGEEEALEWGVKNNDATVRQTSLKNRLTEQTEEMDAELAALQKELPFSVHDANIGMEGITPFDFMEEKA

Nucleotide

• Length: 2379 bp

>NTDB_id=764178 OZA25_RS09260 WP_032873862.1 1796906..1799284(+) (recD2) [Bacillus velezensis strain B8]
GTGGATCAGCTGAACATCGAAGAACAGCCGTATGTAAAAGGCATCATTCATACGGTCATTTATCATAATGACACCAACCT
GTATACAGTGCTGAAAGTCAAAGTTGCAGAAACGTCTGAGGCGATCGAAGACAAGGTCGTATCCGTAACGGGCTACTTCC
CTCTGCTGCAAGAAGATGAGACCTACACATTTTATGGAAAAACCGCCACGCATCCTAAGTTCGGCCTGCAATTTCAGGCT
GAACACTTTAAAAAAGAAATTCCGACCACAAAAGAAGGGATCATTCACTACTTATCAAGTGATCTGTTTGAAGGAATCGG
AAAAAAAACGGCGGAAGAAATCGTCAAAAAGCTCGGAGACGGCGCGCTCAATAAAATTCTGACGGATGCGTCGGTGCTTT
ACGATGTGCCGAAAATGTCGAAAAAGAAAGCGGATAAGCTTGCCGGAGAGCTGCAGCGGCATCAGGGGCTGGAGCAGATT
ATGATCTCTCTGAACCAATACGGTTTCGGGCCCCAGCTATCAATGAAAATATATCAGGCCTACGAAACGGAAACCCTGGA
GAAAATTCAGGAAAATCCTTATCAGCTTGTAAAAGACGTTGAAGGCATCGGCTTTGTGAAAGCTGACGAGCTGGGCGGAA
AAATGGGTCTGTCAGGAAACCACCCGGAGCGGATCAAAGCGGCAATCTTATATACGATTGAATCGACCTGTCTTTCAGAA
GGCCATACGTACATAGAGACAAAGCAGCTGATTATCAATACGCAAACGCTCCTGAATCAGTCAGCTGAAGGCGGCCGCGT
CACAGAAATGGATGCGGCTGACGGCATCATCGCCCTCGGGGAGAGTAAGGATATCGTCATTGAAGGAGAGCGCTGCTATT
TTCCGTCCTTGTTTTACGCCGAACAAAATGTCGCAAAACGCGTGCTCGACATTGCGGCTCAGACGGAGTATGCCGATCAA
TTTCCTGAATCGGAATTTCTGCTTGCACTCGGTGAACTGGAAGAACGGATGAATGTTCAATACGCACCAAGCCAAAAGGA
TGCCATTCAAAAAGCGCTGTCTTCACCGATGCTTTTATTGACCGGAGGACCCGGGACGGGGAAAACGACCGTTATTAAAG
GAATCGTGGAATTATACAGTGAACTGCACGGAGTATCGCTTGACCCCGGTGATTATAAAAAAGACGAGGCGTTTCCGCTG
CTGCTTGCCGCGCCGACGGGAAGAGCCGCAAAACGGATGAGCGAATCTACGGGTCTGCCGGCTGTTACGATTCACAGGCT
GCTCGGCTGGAATGGCGCTGAAGGCTTTACCTACAATGAAGATCAGCCGATTGAAGGGAAACTGATTATTATAGACGAAG
CGAGTATGCTCGATATCTGGCTCGCCAGCCATTTGTTTAAGGCGCTTCCTAAGCACATTCAGCTCATTGTCGTCGGTGAT
GAAGACCAGCTTCCTTCAGTCGGACCGGGGCAGGTGCTCAGAGACCTTTTGGCTTCTGAGGTGCTGCCGACCGTGCGCCT
GACAGATATTTACCGTCAGGCTGAAGGATCATCCATTGTGGAACTTGCGCATGATATGAAAAAAGGACTGCTTCCAAAGG
GGCTGACCGCGCCGACAAAGGACCGCTCATTTATCCGCTGTAATTCTTCACAGATTAAAGAAGTCGTGGATCAGGTCGTT
TCGAACGCGTTAAAAAAGGGGTATACCTCCAGGGATATTCAAGTGCTTGCCCCGATGTACAGGGGAAAAGCGGGAATTAA
CGAGCTGAATATGCTTCTTCAAGACATCATGAATCCGCCGAAAGAAAAAAGGCGGGAGCTGAAATTCGGTGATGTCGTCT
ACAGGACGGGCGATAAAATATTACAGCTTGTCAACCAGCCGGAAAACAATGTGTTTAACGGCGATATCGGCGAAATCGTG
TCCATTTTTTATGCCAAAGAAAATACGGAAAAAGAAGACATGGTCGTCGTCTCGTTTGACGGCAACGAAATCACCTTTAC
GAAAAAGGATTTCAGCCAGTTTACCCACGCTTACTGCTGTTCCATTCATAAGTCGCAGGGAAGCGAATTCCCTATTGTCG
TCCTGCCTGTCGTCAAAGGCTACTATCGAATGCTCAGGAGAAATCTGCTTTATACCGCCATAACAAGAGCGAAAAAATTT
CTGATTCTTTGCGGAGAAGAAGAAGCGCTTGAATGGGGCGTCAAAAACAATGATGCCACCGTCAGACAGACGTCGCTTAA
AAACAGGCTCACAGAGCAGACTGAAGAGATGGATGCAGAACTGGCCGCCCTGCAAAAAGAGCTGCCGTTCAGTGTACATG
ATGCGAACATCGGAATGGAAGGCATCACGCCGTTTGACTTTATGGAAGAAAAAGCGTAA

Domains

Predicted by InterproScan.

• AAA domain (AAA_30) (341-548)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (589-659)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (676-724)

• Helix-hairpin-helix containing domain (HHH_RecD2) (154-244)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	89.001	99.874	0.889