Detailed information NTG0764158

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: OZA25_RS04155
• Genome accession: NZ_CP114038
• Coordinates: 811842..812987 (-)
• Length: 381 a.a.
• NCBI ID: WP_074534220.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain B8
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 806842..817987

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OZA25_RS04130 (OZA25_04130)	-	807125..807558 (+)	434	Protein_772	hypothetical protein	-
OZA25_RS04135 (OZA25_04135)	-	807583..809655 (-)	2073	WP_032875881.1	transglycosylase domain-containing protein	-
OZA25_RS04140 (OZA25_04140)	speE	809855..810685 (+)	831	WP_003151052.1	spermidine synthase	-
OZA25_RS04145 (OZA25_04145)	speB	810744..811616 (+)	873	WP_032875884.1	agmatinase	-
OZA25_RS04150 (OZA25_04150)	-	811739..811858 (-)	120	WP_017418707.1	PhrC/PhrF family phosphatase-inhibitory pheromone	-
OZA25_RS04155 (OZA25_04155)	rapF	811842..812987 (-)	1146	WP_074534220.1	Rap family tetratricopeptide repeat protein	Regulator
OZA25_RS04160 (OZA25_04160)	-	813218..814573 (+)	1356	WP_032875887.1	YncE family protein	-
OZA25_RS04165 (OZA25_04165)	-	814613..815989 (+)	1377	WP_032875890.1	YncE family protein	-
OZA25_RS04170 (OZA25_04170)	-	815996..816508 (-)	513	Protein_780	bacteriocin biosynthesis protein AlbG	-
OZA25_RS04175 (OZA25_04175)	-	816662..817090 (+)	429	WP_032869448.1	DUF1934 domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45737.21 Da
• Isoelectric Point: 5.0614

>NTDB_id=764158 OZA25_RS04155 WP_074534220.1 811842..812987(-) (rapF) [Bacillus velezensis strain B8]
MASVLSSSAVGEKINEWYMYIRRFSIPDAEYLRREIKEELAGLEDDQDLHLYYSLMEFRHNLMLEYLEPLESQRIEEQPR
LSDLLADIDKKQARLTGRLDYYFNFFRGMYELECREYLSAIQFFKKAESKLTYVKDHIEKAEFYFKMSEVYYYMKQTYVS
MDYARQAYLIYKDAEKYNIRLTQCHSLFGANYLDVKQYDHAISHFQKAYTMAELEQQPQLMGRTLFNIALCHNNQNNKVE
AIPHLKEAIAVFEKAQMSHSLPQPYFLLTQIYFKLKNIDNAYDYHKKGISICKEIDDIIYEEKFKFLEYLYMPDPRDTLI
NDCLHFLENKLMYADIEELALDVAKYYYTQEEYKKASVYFLKVEEARQQIEGGVNLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=764158 OZA25_RS04155 WP_074534220.1 811842..812987(-) (rapF) [Bacillus velezensis strain B8]
GTGGCGAGTGTTTTATCATCTTCAGCGGTTGGAGAAAAAATCAACGAATGGTATATGTACATTCGAAGGTTCAGCATCCC
GGACGCCGAGTACTTGCGGAGAGAAATCAAAGAAGAACTTGCAGGTCTGGAAGATGATCAGGATCTTCATCTATACTATT
CTCTCATGGAATTCCGTCACAATCTGATGCTCGAATACCTCGAACCGCTGGAATCGCAGCGGATAGAAGAACAGCCGAGA
CTATCGGATCTGCTCGCGGATATTGATAAAAAGCAGGCCCGGCTGACCGGACGTCTTGATTATTATTTTAATTTTTTCCG
GGGGATGTATGAGCTGGAATGCCGTGAATATCTTTCAGCGATTCAGTTTTTTAAGAAAGCTGAAAGCAAACTGACGTACG
TTAAAGATCATATAGAAAAAGCTGAATTTTACTTTAAAATGTCAGAAGTCTATTATTATATGAAACAAACTTATGTATCG
ATGGATTATGCGCGGCAGGCTTATTTAATTTATAAAGATGCAGAAAAATATAATATTAGATTAACCCAGTGCCATTCTTT
ATTTGGGGCTAATTATCTTGATGTAAAGCAATACGATCACGCGATTTCCCACTTTCAAAAGGCATATACGATGGCTGAAT
TGGAGCAGCAGCCGCAATTAATGGGGAGGACACTTTTTAACATCGCTTTATGCCATAATAATCAAAACAATAAAGTCGAG
GCTATTCCCCATTTAAAAGAAGCCATAGCTGTTTTTGAAAAAGCTCAAATGAGTCATTCACTTCCGCAGCCCTACTTCTT
ACTTACACAGATTTATTTTAAGTTAAAAAATATAGATAACGCGTACGATTATCATAAAAAAGGTATCTCAATATGTAAGG
AAATAGATGATATAATTTACGAGGAAAAATTTAAATTTTTAGAATACTTGTATATGCCGGATCCAAGAGATACATTAATA
AACGATTGTCTGCATTTTCTTGAAAATAAATTGATGTATGCTGATATTGAGGAATTAGCCCTTGATGTAGCTAAATATTA
TTACACACAAGAAGAATATAAAAAAGCTTCTGTCTACTTTTTAAAGGTTGAAGAAGCCAGACAGCAGATCGAAGGAGGAG
TGAATTTATATGAAATTGAAGTATAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

• Tetratricopeptide repeat (TPR_12) (188-254)

• Tetratricopeptide repeat (TPR_8) (265-293)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	70.079	100	0.701
rapC	Bacillus subtilis subsp. subtilis str. 168	54.211	99.738	0.541