Detailed information NTG0764146

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: OZA25_RS00360
• Genome accession: NZ_CP114038
• Coordinates: 66937..68085 (-)
• Length: 382 a.a.
• NCBI ID: WP_007410270.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain B8
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 61937..73085

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OZA25_RS00330 (OZA25_00330)	-	62073..62831 (-)	759	WP_007609404.1	ABC transporter ATP-binding protein	-
OZA25_RS00335 (OZA25_00335)	-	62825..63772 (-)	948	WP_014416905.1	iron chelate uptake ABC transporter family permease subunit	-
OZA25_RS00340 (OZA25_00340)	ceuB	63762..64715 (-)	954	WP_032872883.1	ABC transporter permease	Machinery gene
OZA25_RS00345 (OZA25_00345)	-	65129..66493 (+)	1365	WP_007609394.1	aspartate kinase	-
OZA25_RS00350 (OZA25_00350)	-	66573..66683 (+)	111	WP_369878517.1	YjcZ family sporulation protein	-
OZA25_RS00355 (OZA25_00355)	phrC	66834..66953 (-)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
OZA25_RS00360 (OZA25_00360)	rapC	66937..68085 (-)	1149	WP_007410270.1	Rap family tetratricopeptide repeat protein	Regulator
OZA25_RS00365 (OZA25_00365)	-	68238..69671 (-)	1434	WP_161503657.1	sensor histidine kinase	-
OZA25_RS00370 (OZA25_00370)	-	69658..70341 (-)	684	WP_032872879.1	response regulator transcription factor	-
OZA25_RS00375 (OZA25_00375)	-	70554..71984 (+)	1431	WP_032872876.1	ABC transporter permease	-
OZA25_RS00380 (OZA25_00380)	-	71999..72682 (+)	684	WP_032872874.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45475.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=764146 OZA25_RS00360 WP_007410270.1 66937..68085(-) (rapC) [Bacillus velezensis strain B8]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=764146 OZA25_RS00360 WP_007410270.1 66937..68085(-) (rapC) [Bacillus velezensis strain B8]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTACCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAGGGGCTTCTCGATTATTACGTCAATTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCATGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTGGAGCAGGACACATATAACGTCCGGATTATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTTGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAGATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568