Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   LDO79_RS09465 Genome accession   NZ_AP024984
Coordinates   1744620..1745387 (-) Length   255 a.a.
NCBI ID   WP_011228964.1    Uniprot ID   Q5SH71
Organism   Thermus thermophilus strain JCM10941     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 1739620..1750387
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LDO79_RS09435 (JCM10941_18350) - 1739908..1740360 (+) 453 WP_011228960.1 arsenate reductase ArsC -
  LDO79_RS09440 (JCM10941_18360) ubiE 1740357..1741019 (-) 663 WP_011228961.1 bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE -
  LDO79_RS09445 (JCM10941_18370) - 1741111..1742925 (+) 1815 WP_011228962.1 ABC transporter permease -
  LDO79_RS09450 (JCM10941_18380) - 1742922..1743845 (+) 924 WP_011228963.1 ABC transporter permease -
  LDO79_RS09455 (JCM10941_18390) - 1743833..1744090 (-) 258 WP_011173881.1 hypothetical protein -
  LDO79_RS09460 (JCM10941_18400) - 1744087..1744623 (-) 537 WP_011173882.1 flavin reductase family protein -
  LDO79_RS09465 (JCM10941_18410) yaaT 1744620..1745387 (-) 768 WP_011228964.1 regulatory iron-sulfur-containing complex subunit RicT Regulator
  LDO79_RS09470 (JCM10941_18420) - 1745384..1746190 (-) 807 WP_011228965.1 DNA polymerase III subunit delta' -
  LDO79_RS09475 (JCM10941_18430) - 1746157..1746879 (-) 723 WP_011228966.1 metallophosphoesterase -
  LDO79_RS09480 (JCM10941_18440) - 1746894..1747523 (+) 630 WP_011173885.1 hypothetical protein -
  LDO79_RS09485 (JCM10941_18450) - 1747534..1747734 (+) 201 WP_011173886.1 hypothetical protein -
  LDO79_RS09490 (JCM10941_18460) - 1747895..1749112 (+) 1218 WP_231834462.1 S-layer homology domain-containing protein -

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 28439.95 Da        Isoelectric Point: 9.1292

>NTDB_id=76412 LDO79_RS09465 WP_011228964.1 1744620..1745387(-) (yaaT) [Thermus thermophilus strain JCM10941]
MTVGVRFRTPVLRYVRFRGEAPPVDAFVVVRTGRGLEVGRVRTPPVDRPASGEVVRLASKEDLDRAARLRARAEEALHFV
RARFREEGVRAKVLGCDFTLDGRHLVIHYSAEERVNLRRFAPELARALGARIEFVAEGPREEAQYLGTLGACGMESCCST
WLQGFAQVSIKLARDQQLPLNPEKISGPCGRLLCCLTYEHPVYQELLKELPRKNARVCTKAGLCGKVQKVNPLKGTVELH
LEDGKTLEVPKEDLA

Nucleotide


Download         Length: 768 bp        

>NTDB_id=76412 LDO79_RS09465 WP_011228964.1 1744620..1745387(-) (yaaT) [Thermus thermophilus strain JCM10941]
ATGACCGTGGGCGTACGCTTCCGCACCCCCGTCCTCCGCTACGTCCGCTTCCGGGGGGAGGCCCCGCCCGTGGACGCCTT
CGTGGTGGTCCGCACCGGGCGGGGGCTGGAGGTGGGCCGGGTCCGCACCCCCCCCGTGGACCGGCCGGCCTCGGGGGAGG
TGGTGCGGCTCGCCTCCAAGGAGGACCTGGACCGGGCCGCGAGGCTCCGCGCCCGGGCGGAGGAGGCCCTCCACTTCGTC
CGGGCCCGGTTCCGGGAGGAGGGGGTGCGGGCCAAGGTCCTGGGGTGCGACTTCACCCTGGACGGCCGCCACCTCGTCAT
CCACTACAGCGCCGAGGAGCGGGTGAACCTGAGGCGCTTTGCCCCCGAGCTCGCCCGCGCCCTGGGGGCCCGGATTGAGT
TCGTGGCCGAAGGCCCCCGGGAGGAGGCCCAGTACCTTGGGACCTTGGGGGCCTGCGGCATGGAGTCCTGCTGCTCCACC
TGGCTCCAGGGCTTCGCCCAGGTGTCCATCAAGCTCGCCCGGGACCAGCAGCTTCCCCTGAACCCGGAGAAGATCTCGGG
CCCCTGCGGGAGGCTTCTCTGCTGCCTCACCTACGAGCACCCCGTCTACCAGGAGCTTCTCAAGGAGCTTCCCCGGAAAA
ACGCCCGGGTCTGCACCAAGGCCGGCCTCTGCGGCAAGGTGCAGAAGGTGAACCCCCTGAAGGGCACGGTGGAGCTCCAC
CTGGAGGACGGGAAGACCTTGGAGGTTCCCAAGGAGGATCTGGCATGA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(53-135)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q5SH71

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

35.249

100

0.361