Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   QMY17_RS06720 Genome accession   NZ_CP125812
Coordinates   1263792..1264487 (+) Length   231 a.a.
NCBI ID   WP_014480621.1    Uniprot ID   -
Organism   Bacillus subtilis strain N3378-3At     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1258792..1269487
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QMY17_RS06695 ytrB 1258818..1259696 (+) 879 WP_003229123.1 ABC transporter ATP-binding protein YtrB -
  QMY17_RS06700 - 1259690..1260676 (+) 987 WP_014480624.1 ABC transporter permease subunit -
  QMY17_RS06705 ytrD 1260708..1261685 (+) 978 WP_014480623.1 ABC transporter permease YtrD -
  QMY17_RS06710 ytrE 1261700..1262395 (+) 696 WP_014477726.1 ABC transporter ATP-binding protein YtrE -
  QMY17_RS06715 ytrF 1262385..1263695 (+) 1311 WP_014480622.1 ABC transporter permease YtrF -
  QMY17_RS06720 braR 1263792..1264487 (+) 696 WP_014480621.1 two-component response regulator BceR Regulator
  QMY17_RS06725 bceS 1264480..1265484 (+) 1005 WP_014480620.1 two-component sensor histidine kinase BceS -
  QMY17_RS06730 bceA 1265586..1266347 (+) 762 WP_003229137.1 bacitracin ABC transporter ATP-binding protein BceA -
  QMY17_RS06735 bceB 1266337..1268277 (+) 1941 WP_014480619.1 bacitracin ABC transporter permease BceB -
  QMY17_RS06740 yttA 1268314..1269060 (-) 747 WP_014480618.1 LMBR1 domain-containing protein -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26908.74 Da        Isoelectric Point: 5.3731

>NTDB_id=764108 QMY17_RS06720 WP_014480621.1 1263792..1264487(+) (braR) [Bacillus subtilis strain N3378-3At]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFAAVNPDCVIIDVQLPKFDGFHWCRQIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNTEPNTIKTWCGAAVDAEQNLVSNDKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDALQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=764108 QMY17_RS06720 WP_014480621.1 1263792..1264487(+) (braR) [Bacillus subtilis strain N3378-3At]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTGCGGCGGTTAATCCTGATTGTGTCATTATTGATGTAC
AGCTGCCTAAATTTGACGGCTTTCATTGGTGCCGGCAGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
CGGGATCATCCTGCTGATATGGTGATGTCCATGCAGCTCGGGGCAGATGACTTTATCCAAAAGCCATTTCATTTTGATGT
GCTGATCGCGAAAATCCAAGCGATGTTCCGGCGTGTGCACCATTATAATACGGAGCCGAATACGATTAAAACGTGGTGCG
GCGCTGCTGTAGACGCGGAGCAGAACCTCGTCAGCAATGACAAAGGATCTGTTGAACTGACCAAAAATGAAATGTTCATT
CTAAAACAATTAATAGAGCAAAAAAACAAGATCGTCAGCCGGGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGACGCCCTGCAGCTTGGCGCATATATCG
AGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAAGTTCTATGATTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)

Response regulator receiver domain (Response_reg)

(5-113)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377