Detailed information    

insolico Bioinformatically predicted

Overview

Name   comQ   Type   Regulator
Locus tag   QMY17_RS05910 Genome accession   NZ_CP125812
Coordinates   1120821..1121684 (+) Length   287 a.a.
NCBI ID   WP_014480705.1    Uniprot ID   Q9FAF1
Organism   Bacillus subtilis strain N3378-3At     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 1115821..1126684
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QMY17_RS05880 pncA 1116287..1116838 (+) 552 WP_014480709.1 cysteine hydrolase family protein -
  QMY17_RS05885 pncB 1116854..1118326 (+) 1473 WP_014480708.1 nicotinate phosphoribosyltransferase -
  QMY17_RS05890 pdeH 1118462..1119691 (+) 1230 WP_014480707.1 cyclic di-GMP phosphodiesterase -
  QMY17_RS05895 - 1119667..1120035 (-) 369 WP_014477834.1 hypothetical protein -
  QMY17_RS05900 - 1120149..1120274 (-) 126 WP_003228793.1 hypothetical protein -
  QMY17_RS05905 degQ 1120496..1120636 (+) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  QMY17_RS05910 comQ 1120821..1121684 (+) 864 WP_014480705.1 polyprenyl synthetase family protein Regulator
  QMY17_RS05915 comX 1121686..1121907 (+) 222 WP_014480704.1 competence pheromone ComX -
  QMY17_RS05920 comP 1121923..1124235 (+) 2313 WP_014480703.1 sensor histidine kinase Regulator
  QMY17_RS05925 comA 1124316..1124960 (+) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  QMY17_RS05930 yuxO 1124979..1125359 (+) 381 WP_017695528.1 hotdog fold thioesterase -
  QMY17_RS05935 mnhG 1125398..1125772 (-) 375 WP_014477830.1 monovalent cation/H(+) antiporter subunit G -
  QMY17_RS05940 mrpF 1125756..1126040 (-) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  QMY17_RS05945 mrpE 1126040..1126516 (-) 477 WP_003228815.1 Na+/H+ antiporter subunit E -

Sequence

Protein


Download         Length: 287 a.a.        Molecular weight: 32882.57 Da        Isoelectric Point: 5.2201

>NTDB_id=764105 QMY17_RS05910 WP_014480705.1 1120821..1121684(+) (comQ) [Bacillus subtilis strain N3378-3At]
MKEIVDENILNEDLKVKLISFIKEKKQFSFAELAYYHYIAFDGKNDKAIELLASGIELLILSADIFDDIEDKDNLQASWM
KLDPSIATNAATALYTLSLQVIGSVSNHPKLLSLTLQYSLQSLQGQHVDLNLTASSESEYIEMIKLKSGSLVTLPSILGV
YLATGEYNETVEEYSRYLGIVEQIANDHYGLYYPNYNDFKTRHTLAFNYLKNKFNQSSIDLLNFYAQENHMINNLEDLKG
KLRESGVIQYLNVIKNLAVENFKESFKKLRLDEQRKNKLLIQLLRGI

Nucleotide


Download         Length: 864 bp        

>NTDB_id=764105 QMY17_RS05910 WP_014480705.1 1120821..1121684(+) (comQ) [Bacillus subtilis strain N3378-3At]
ATGAAGGAGATTGTGGATGAAAATATTTTAAATGAGGACTTAAAAGTGAAGCTCATTTCTTTTATCAAAGAAAAAAAACA
ATTTTCATTTGCAGAACTGGCTTATTACCATTACATAGCATTTGATGGAAAAAACGACAAAGCAATTGAGTTATTGGCGT
CAGGTATAGAACTTTTAATTTTATCTGCGGACATTTTTGACGATATTGAGGATAAGGACAATCTTCAGGCTTCTTGGATG
AAATTAGATCCTTCTATAGCAACTAACGCAGCTACCGCACTTTATACATTAAGTCTGCAAGTAATAGGTTCAGTCTCAAA
TCATCCAAAACTTTTAAGCCTTACTTTGCAATATTCACTCCAATCTTTACAAGGACAACATGTAGATTTGAATTTAACAG
CCTCATCAGAATCAGAGTATATTGAAATGATTAAACTTAAGTCGGGTTCTCTGGTAACATTGCCCAGTATTCTTGGTGTA
TATCTGGCAACTGGAGAATATAATGAAACAGTTGAGGAGTATTCACGTTATTTAGGTATAGTCGAGCAAATTGCAAATGA
TCACTATGGACTTTATTACCCTAACTATAATGACTTCAAAACTAGACATACGCTTGCCTTCAATTATCTTAAAAATAAAT
TTAACCAATCATCAATTGACTTATTAAATTTTTATGCGCAAGAAAATCATATGATAAATAATTTGGAAGATTTGAAGGGA
AAGTTAAGAGAATCAGGTGTAATACAATATTTGAATGTTATAAAAAATTTAGCAGTGGAAAATTTTAAGGAATCATTCAA
AAAACTGAGATTAGATGAACAAAGAAAAAATAAATTACTTATTCAATTATTAAGGGGGATTTAA

Domains

Predicted by InterProScan.

Polyprenyl synthetase (polyprenyl_synt)

(45-195)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q9FAF1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

45

97.561

0.439