Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   QMY17_RS03645 Genome accession   NZ_CP125812
Coordinates   707388..708101 (+) Length   237 a.a.
NCBI ID   WP_014481000.1    Uniprot ID   -
Organism   Bacillus subtilis strain N3378-3At     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 702388..713101
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QMY17_RS03610 rppI 702635..703111 (+) 477 WP_014481002.1 8-oxo-dGTP diphosphatase -
  QMY17_RS03615 rapZ 703136..704023 (+) 888 WP_003243903.1 RNase adapter RapZ -
  QMY17_RS03620 mgfK 704025..704978 (+) 954 WP_003244450.1 gluconeogenesis morphogenetic factor -
  QMY17_RS03625 whiA 705001..705951 (+) 951 WP_003228147.1 DNA-binding protein WhiA -
  QMY17_RS03630 crh 705975..706232 (+) 258 WP_003219835.1 HPr family phosphocarrier protein -
  QMY17_RS03635 yvcN 706233..706997 (+) 765 WP_015251150.1 arylamine N-acetyltransferase family protein -
  QMY17_RS03640 - 707033..707241 (-) 209 Protein_714 hypothetical protein -
  QMY17_RS03645 braR 707388..708101 (+) 714 WP_014481000.1 two-component system response regulator PsdR Regulator
  QMY17_RS03650 psdS 708095..709165 (+) 1071 WP_014480999.1 two-component sensor histidine kinase PsdS -
  QMY17_RS03655 psdA 709248..710027 (+) 780 WP_014480998.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  QMY17_RS03660 psdB 710002..711942 (+) 1941 WP_014480997.1 lantibiotic ABC transporter permease PsdB -
  QMY17_RS03665 ghrB 711979..712956 (-) 978 WP_072592561.1 2-hydroxyacid dehydrogenase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27541.46 Da        Isoelectric Point: 4.6774

>NTDB_id=764097 QMY17_RS03645 WP_014481000.1 707388..708101(+) (braR) [Bacillus subtilis strain N3378-3At]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNAPIIFISA
RIDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRIVELGGLTIYPDQNEAEWNSSRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLKDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=764097 QMY17_RS03645 WP_014481000.1 707388..708101(+) (braR) [Bacillus subtilis strain N3378-3At]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGATCTTGTGCTGCTTGATATCA
ACCTGCCTTTTTTTGACGGATTTTATTGGTGCAGGCAAATCCGTACCATTTCCAATGCGCCGATTATCTTTATATCGGCA
CGGATCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAGCCGTTCCATCTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATATTCGCCCTCTTTGCCGCAGGAATCTAGAATAG
TGGAGCTTGGTGGGCTGACGATTTATCCTGATCAAAATGAGGCCGAATGGAACAGCTCCCGTATTCTGTTTTCCCAAAAA
GAATTTCAGCTTCTCTCTATTTTTGTGAGGGAGCATAAAAAAATTGTTTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAACCGGCTGCGGAGAAAACTGGAGAATGCCGGACTGA
AAGATTGCATTTCCACAATCAGAGGACAAGGCTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAGTGTTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.982

94.515

0.435