NTDB

Overview

Name	ceuB	Type	Machinery gene
Locus tag	OTR81_RS10080	Genome accession	NZ_CP113980
Coordinates	2126553..2127503 (+)	Length	316 a.a.
NCBI ID	WP_036090767.1	Uniprot ID	A0A3N9UC05
Organism	Listeria newyorkensis strain CMB191063
Function	DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2121553..2132503

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OTR81_RS10060 (OTR81_01475)	ald	2123711..2124814 (+)	1104	WP_036090763.1	alanine dehydrogenase	-
OTR81_RS10065 (OTR81_01470)	tdcB	2124814..2125812 (+)	999	WP_077917863.1	bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB	-
OTR81_RS10070 (OTR81_01465)	-	2125894..2126124 (+)	231	WP_036091601.1	lipopolysaccharide assembly protein LapA domain-containing protein	-
OTR81_RS10075 (OTR81_01460)	-	2126180..2126350 (-)	171	WP_156110608.1	hypothetical protein	-
OTR81_RS10080 (OTR81_01455)	ceuB	2126553..2127503 (+)	951	WP_036090767.1	ABC transporter permease	Machinery gene
OTR81_RS10085 (OTR81_01450)	-	2127496..2128437 (+)	942	WP_036090769.1	iron chelate uptake ABC transporter family permease subunit	-
OTR81_RS10090 (OTR81_01445)	-	2128434..2129192 (+)	759	WP_036090772.1	ABC transporter ATP-binding protein	-
OTR81_RS10095 (OTR81_01440)	-	2129272..2130213 (+)	942	WP_036090774.1	siderophore ABC transporter substrate-binding protein	-
OTR81_RS10100 (OTR81_01435)	-	2130254..2130808 (-)	555	WP_036090777.1	GNAT family N-acetyltransferase	-
OTR81_RS10105 (OTR81_01430)	-	2130935..2131738 (+)	804	WP_036090780.1	YwqG family protein	-
OTR81_RS10110 (OTR81_01425)	-	2131987..2132331 (+)	345	WP_036090783.1	PadR family transcriptional regulator	-

Sequence

Protein

Download Length: 316 a.a. Molecular weight: 34945.40 Da Isoelectric Point: 10.0669

                                >NTDB_id=763992 OTR81_RS10080 WP_036090767.1 2126553..2127503(+) (ceuB) [Listeria newyorkensis strain CMB191063]

MKRAILIIVFLLLALLSVFVGVQKISIVHIFELTREQWDIIWISRIPRLVSIILAGAGISICGMIMQSLTQNKFVSPTTA

GTMDAARLGILVSLLVFTTASPLVKMGVAFLFALLGTFIFMQILERIPFKDTIFIPLVGLMFGGILSSITTFFAYKFDLI

QNISSWLQGDFSMVLKGRYELLYVAVPLIVIAYLYANQLTVAGMGETFSRNLGLSYKAIMRIGLVIVAFITASVVLTVGM

IPFLGLIVPNIVSIYRGDNIKKTLFDTAVFGATFLLFCDVLGRVIIYPYEISISLMVGIIGSAIFIYLLMRRKAYA

Nucleotide

Download Length: 951 bp

                                >NTDB_id=763992 OTR81_RS10080 WP_036090767.1 2126553..2127503(+) (ceuB) [Listeria newyorkensis strain CMB191063]

TTGAAGAGAGCGATACTTATTATTGTGTTTTTATTATTGGCATTGCTTTCGGTGTTCGTTGGCGTGCAGAAGATTTCTAT

TGTACATATTTTTGAATTGACGCGGGAACAGTGGGACATTATTTGGATAAGTCGGATTCCTAGGCTTGTGAGTATTATTT

TGGCCGGAGCTGGGATTAGTATTTGTGGGATGATTATGCAGAGTTTGACGCAGAATAAGTTTGTTTCACCAACGACGGCG

GGGACGATGGATGCTGCGAGATTAGGGATATTGGTGTCTTTGCTTGTTTTTACAACGGCGAGTCCTTTGGTGAAAATGGG

TGTGGCGTTTCTGTTTGCGCTTCTCGGGACATTTATATTTATGCAGATTTTGGAGCGAATTCCGTTTAAAGATACGATTT

TTATTCCGCTTGTTGGGTTGATGTTCGGCGGGATTCTCAGTTCGATTACGACGTTCTTTGCGTATAAGTTTGATTTGATT

CAAAATATTTCTTCGTGGCTTCAAGGGGATTTCTCGATGGTGCTAAAAGGGCGATATGAGCTGCTTTACGTTGCGGTTCC

GCTGATTGTGATTGCGTATTTGTATGCGAATCAGCTCACGGTTGCTGGGATGGGGGAGACGTTTTCGCGGAATTTGGGAT

TGTCTTATAAGGCGATTATGCGGATTGGATTGGTGATAGTTGCGTTTATTACGGCGTCTGTGGTTCTGACGGTTGGCATG

ATACCTTTTCTTGGCTTGATTGTACCGAATATTGTGTCGATTTATCGCGGGGATAATATTAAGAAAACTTTGTTTGATAC

GGCGGTTTTTGGTGCGACTTTCTTGCTGTTTTGTGACGTGCTCGGTCGGGTGATTATTTATCCGTACGAAATTTCGATTA

GTTTGATGGTTGGGATTATTGGGAGCGCGATTTTTATTTATCTGCTAATGAGGAGAAAAGCTTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)

Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.

3D structure

Source	ID	Structure
AlphaFold DB	A0A3N9UC05

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.

Visualization of predicted probability:

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	H_a-value
ceuB	Campylobacter jejuni subsp. jejuni 81-176	54.167	98.734	0.535

Detailed information NTG0763992