Detailed information NTG0763971

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: OZ675_RS15260
• Genome accession: NZ_CP113978
• Coordinates: 3291216..3292352 (+)
• Length: 378 a.a.
• NCBI ID: WP_058907461.1
• Uniprot ID: A0A454TW93
• Organism: Ralstonia pseudosolanacearum strain RS26
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3286216..3297352

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OZ675_RS15235 (OZ675_15245)	-	3286578..3286826 (-)	249	WP_011000353.1	YfhL family 4Fe-4S dicluster ferredoxin	-
OZ675_RS15240 (OZ675_15250)	coaD	3286877..3287383 (-)	507	WP_003262550.1	pantetheine-phosphate adenylyltransferase	-
OZ675_RS15245 (OZ675_15255)	rsmD	3287579..3288226 (-)	648	WP_016724254.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
OZ675_RS15250 (OZ675_15260)	-	3288307..3289650 (-)	1344	WP_089190479.1	pitrilysin family protein	-
OZ675_RS15255 (OZ675_15265)	-	3289650..3291155 (-)	1506	WP_011000350.1	pitrilysin family protein	-
OZ675_RS15260 (OZ675_15270)	pilA	3291216..3292352 (+)	1137	WP_058907461.1	signal recognition particle-docking protein FtsY	Machinery gene
OZ675_RS15265 (OZ675_15275)	-	3292349..3292987 (-)	639	WP_058907460.1	LysE/ArgO family amino acid transporter	-
OZ675_RS15270 (OZ675_15280)	maiA	3292984..3293634 (-)	651	WP_058907459.1	maleylacetoacetate isomerase	-
OZ675_RS15275 (OZ675_15285)	-	3293638..3294339 (-)	702	WP_011000346.1	fumarylacetoacetate hydrolase family protein	-
OZ675_RS15280 (OZ675_15290)	-	3294487..3295113 (+)	627	WP_038938076.1	ANTAR domain-containing response regulator	-
OZ675_RS15285 (OZ675_15295)	-	3295390..3296652 (+)	1263	WP_011000344.1	CmpA/NrtA family ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 378 a.a.
• Molecular weight: 40070.29 Da
• Isoelectric Point: 5.8101

>NTDB_id=763971 OZ675_RS15260 WP_058907461.1 3291216..3292352(+) (pilA) [Ralstonia pseudosolanacearum strain RS26]
MFSFWKKRKAEPQPAAEPAPPAAPEAAQAPAPAPAPVAAPVPTPAPAPVAVPDTPAAPAALDMQADDIETVPTPPVVEQA
RKGWMSRLRSGLSKTSKSLTTLFVGVKVDEALFEELETALLMADAGVDATEYLLDELRRRVKAQRIETAEGVKTALRDLL
IELLHPLEKTMVLGRDQPTVIMIAGVNGAGKTTSIGKLCKHFQTYGQSVLLAAGDTFRAAAREQLVIWGQRNNVTVVAQE
SGDPAAVIFDAVNAARARGIDIVMADTAGRLPTQLHLMEELKKVRRVIGKAMATAPHETLLVIDANTGQNALAQVKAFDD
ALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEQVEDLQPFSAREFADALLG

Nucleotide

• Length: 1137 bp

>NTDB_id=763971 OZ675_RS15260 WP_058907461.1 3291216..3292352(+) (pilA) [Ralstonia pseudosolanacearum strain RS26]
ATGTTTAGTTTCTGGAAGAAGCGCAAGGCAGAGCCCCAGCCGGCTGCCGAACCGGCGCCGCCCGCCGCGCCCGAAGCCGC
ACAGGCTCCTGCTCCTGCCCCGGCCCCGGTTGCCGCCCCCGTCCCCACGCCGGCTCCCGCCCCGGTCGCCGTGCCGGATA
CGCCGGCCGCGCCGGCTGCGCTGGACATGCAGGCCGATGACATCGAGACCGTGCCGACGCCGCCCGTGGTGGAGCAGGCG
CGCAAAGGCTGGATGTCGCGCCTGCGCTCGGGCCTGTCGAAGACCAGCAAGAGCCTGACCACGCTGTTCGTCGGCGTGAA
GGTGGACGAGGCGCTGTTCGAGGAGCTGGAGACCGCGCTGCTGATGGCCGATGCCGGCGTCGATGCCACCGAGTACCTGC
TGGACGAACTGCGCCGCCGCGTGAAGGCCCAGCGCATCGAGACCGCCGAGGGCGTGAAGACCGCGCTGCGCGACCTGCTC
ATCGAGCTGCTGCATCCGCTCGAAAAGACCATGGTGCTCGGCCGCGACCAGCCGACGGTGATCATGATCGCGGGCGTCAA
CGGCGCCGGCAAGACCACCAGCATCGGCAAGCTGTGCAAGCACTTCCAGACCTATGGACAGTCCGTGCTGCTGGCCGCCG
GCGACACCTTCCGCGCCGCCGCGCGCGAGCAGCTGGTGATCTGGGGCCAGCGCAACAACGTGACCGTGGTGGCGCAGGAA
TCGGGCGACCCGGCCGCCGTGATCTTCGACGCGGTGAACGCGGCGCGCGCCCGCGGCATCGACATCGTCATGGCCGACAC
CGCCGGCCGCCTGCCGACCCAGCTGCACCTGATGGAAGAGCTGAAGAAGGTGCGCCGCGTGATCGGCAAAGCGATGGCGA
CCGCGCCGCACGAGACCCTGCTGGTGATCGACGCCAACACCGGCCAGAACGCGCTGGCGCAGGTGAAAGCCTTCGACGAT
GCGCTCGGCCTGACCGGCCTGATCGTCACCAAGCTGGACGGCACCGCCAAGGGCGGCATCCTGGCCGCCATCGCGCGGCA
GCGGCCGGTGCCGGTATATTTCATCGGCGTGGGCGAGCAGGTGGAAGACCTGCAGCCGTTCTCCGCGCGCGAATTCGCCG
ACGCGCTGCTGGGCTAA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (178-378)

• SRP54-type protein, helical bundle domain (SRP54_N) (97-158)

3D structure

• AlphaFold DB: A0A454TW93

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	52.163	100	0.574