Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   QLQ05_RS18040 Genome accession   NZ_CP125762
Coordinates   3354402..3355145 (-) Length   247 a.a.
NCBI ID   WP_003233230.1    Uniprot ID   G4NRP4
Organism   Bacillus subtilis strain KRS015     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 3349402..3360145
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QLQ05_RS18020 - 3349781..3351172 (+) 1392 WP_003233218.1 hypothetical protein -
  QLQ05_RS18025 sndC 3351245..3352435 (+) 1191 WP_003245681.1 N-acetyl amino acid acetylase SndC -
  QLQ05_RS18030 ecsC 3352453..3353163 (-) 711 WP_003233225.1 EcsC family protein -
  QLQ05_RS18035 ecsB 3353183..3354409 (-) 1227 WP_003245169.1 ABC transporter permease EcsB -
  QLQ05_RS18040 pptA 3354402..3355145 (-) 744 WP_003233230.1 ABC transporter ATP-binding protein EcsA Regulator
  QLQ05_RS18045 hinT 3355633..3356070 (+) 438 WP_003233231.1 HIT family protein -
  QLQ05_RS18050 serC 3356217..3357296 (+) 1080 WP_003233234.1 3-phosphoserine/phosphohydroxythreonine transaminase -
  QLQ05_RS18055 trpP 3357421..3357939 (+) 519 WP_003233236.1 tryptophan transporter TrpP -
  QLQ05_RS18060 - 3358013..3358204 (-) 192 WP_003233238.1 hypothetical protein -
  QLQ05_RS18065 yhaH 3358334..3358690 (+) 357 WP_003245875.1 YtxH domain-containing protein -
  QLQ05_RS18070 scoC 3358868..3359479 (+) 612 WP_003239501.1 HTH-type transcriptional regulator Hpr -
  QLQ05_RS18075 yhaI 3359476..3359817 (-) 342 WP_009966921.1 YhaI family protein -

Sequence

Protein


Download         Length: 247 a.a.        Molecular weight: 27722.20 Da        Isoelectric Point: 5.9114

>NTDB_id=763937 QLQ05_RS18040 WP_003233230.1 3354402..3355145(-) (pptA) [Bacillus subtilis strain KRS015]
MSLLSVKDLTGGYTRNPVLKNVSFTLEPNQIVGLIGLNGAGKSTTIRHIIGLMDPHKGSIELNGKTFAEDPEGYRSQFTY
IPETPVLYEELTLMEHLELTAMAYGLSKETMEKRLPPLLKEFRMEKRLKWFPAHFSKGMKQKVMIMCAFLAEPALYIIDE
PFLGLDPLAINALLERMNEAKKGGASVLMSTHILATAERYCDSFIILHNGEVRARGTLSELREQFGMKDAALDDLYLELT
KEDAGHE

Nucleotide


Download         Length: 744 bp        

>NTDB_id=763937 QLQ05_RS18040 WP_003233230.1 3354402..3355145(-) (pptA) [Bacillus subtilis strain KRS015]
ATGTCTCTGCTATCGGTAAAAGACTTGACCGGCGGATATACAAGGAATCCGGTTTTAAAAAACGTATCATTCACCCTTGA
ACCGAATCAAATTGTCGGCTTAATCGGGCTGAATGGTGCTGGTAAAAGTACAACAATCAGACACATCATCGGGCTGATGG
ACCCGCATAAAGGTTCAATCGAATTAAACGGTAAAACGTTTGCTGAGGATCCGGAAGGCTACCGTTCACAATTTACCTAT
ATACCTGAAACACCTGTTTTATACGAAGAATTGACGCTGATGGAGCATCTTGAACTAACAGCCATGGCATATGGACTGTC
AAAAGAAACGATGGAGAAAAGGCTGCCTCCGCTACTAAAGGAATTCCGAATGGAAAAGAGGCTGAAGTGGTTCCCGGCCC
ATTTTTCTAAAGGAATGAAGCAGAAGGTTATGATTATGTGCGCATTTTTGGCAGAGCCTGCGCTCTACATTATTGATGAG
CCTTTTCTAGGGCTTGATCCGCTTGCCATTAACGCGCTGCTTGAACGGATGAATGAAGCGAAAAAAGGCGGGGCGAGCGT
GCTGATGTCAACACACATTTTGGCAACGGCAGAACGCTATTGCGATTCGTTTATTATTTTACATAACGGCGAGGTGCGGG
CGCGCGGCACGCTGTCAGAGCTCAGAGAGCAGTTTGGAATGAAGGACGCGGCGCTGGACGATTTGTATCTTGAGCTTACA
AAGGAAGACGCTGGCCATGAATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-162)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NRP4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

56.904

96.761

0.551
  pptA Streptococcus thermophilus LMD-9

56.485

96.761

0.547